KEGG   Bos taurus (cow): 512622
Entry
512622            CDS       T01008                                 
Symbol
KDM4A
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
bta  Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:bta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bta03036]
    512622 (KDM4A)
Enzymes [BR:bta01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     512622 (KDM4A)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     512622 (KDM4A)
Chromosome and associated proteins [BR:bta03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    512622 (KDM4A)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 JmjN zf-HC5HC2H PHD Tudor_5 53-BP1_Tudor LBR_tudor Tox-REase-7 DUF4537
Other DBs
NCBI-GeneID: 512622
NCBI-ProteinID: NP_001193245
BGD-bta: BT25981
Ensembl: ENSBTAG00000002078
VGNC: 30527
UniProt: E1BPL5
Position
3:complement(102342572..102382986)
AA seq 1066 aa
MASESETLNPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYD
DIDDLVIPAPIQQLVTGQSGLFTQYNIQKKAMTVREFRKIANSDKYCTPRYSEFEELERK
YWKNLTFNPPIYGADVNGTLYEKHVDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG
KQAVLCSCRKDMVKISMDVFVRKFQPERYKLWKAGKDSTVIDHTLPTPEAAEFLKESELA
LRARKEEDCPEEEETEGVEDGEEGDLKRSLAKHRIGTKRHRVCLEIPQEVSQSELFPKEE
LGSGQYDMAECQAALSPVRPTHSSVRQVEDSLTFPDYSDSTEVKFEELKNVKLEEDDEDE
EEEHEAAVLDLSVNPASLGRLVFSGSKEKSSSSLGSGSSQDSVSSDSETSEPLSCRAQGQ
TGVLTVHSYARGDGRVLPGEPCARKKGGATRSISERELAEVADEYMFSLEESKKSKGRRQ
PLSKLPRHHPLVLQDCVSDDELPEQLTPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEFN
EAMAQQAPHCAVCMIFQTYHQVEFGGFGQSCGSAPDLAPQTQRTKPLIPEMCFTSTGCST
DINLSTPYLEEDGTSLLVSCKKCSVRVHASCYGVPPAKASEDWMCSRCSANALEEDCCLC
SLRGGALQRANDDRWVHVSCAVAILEARFVNIAERSPVDVSKIPLPRFKLKCVFCKKRRK
RTAGCCVQCSHGRCPTAFHVSCAQAAGVMMQPDDWPFVVFITCFRHKIPNLERAKGALQS
ITAGQKVISKHKNGRFYQCEVVRLTTETFYEVNFDDGSFSDNLYPEDIVSQDCLQLGPPA
EGEVVQVRWTDGQVYGAKFVASHPIQMYQVEFEDGSQLVVKRDDVYTLDEELPKRVKSRL
SVASDMRFNEIFTEKEVKQEKKRQRVINSRYREDYIEPALYRAIME
NT seq 3201 nt   +upstreamnt  +downstreamnt
atggcttctgaatctgaaaccttgaatcccagtgctcggatcatgaccttctacccgact
atggaggagttccgaaacttcagtcgttacattgcttatattgaatcccaaggagctcat
cgggctgggctggctaaggttgttcctccaaaggagtggaagccacgagcctcctatgat
gatatcgatgacctggttattcctgcccccatccagcagctggtgacggggcagtctggc
ctctttactcagtacaacatacagaagaaggccatgactgtgcgagagttccgcaagata
gccaacagtgataagtactgtaccccacgctatagtgaatttgaagagcttgaacggaaa
tactggaaaaatctcacgttcaatcccccaatctatggtgcagatgtgaatggcactctc
tatgaaaagcatgtagatgagtggaatattggccggctgagaaccatcctggacttggtg
gaaaaggagagtgggatcaccatcgagggtgtgaacaccccgtacctgtacttcggcatg
tggaagacatcctttgcctggcacaccgaagacatggacttgtacagcatcaattacctg
cacttcggagagcccaagtcctggtactccgtcccgcccgagcacggaaagcggctggag
cgcctggccaaaggctttttcccaggcagtgctcaaagctgtgaggcttttctccgccat
aagatgaccttgatttctcctttaatgctgaagaaatacggaattccctttgacaaggtg
actcaggaagccggagaatttatgatcactttcccttacggctaccatgctggctttaac
catggcttcaactgtgccgaatccaccaactttgctacccggcggtggatcgagtatggc
aaacaagctgtgctgtgctcctgcaggaaggacatggtgaagatctccatggacgtgttt
gtgaggaagttccagccagaaagatacaagctctggaaagctgggaaggacagcaccgtc
atcgaccacactctgcccacaccagaagcagccgagtttcttaaggagagtgaactggcc
ctgagagcccggaaggaggaggactgcccagaggaggaggagacggagggggtggaggat
ggagaggagggcgacctgaagaggagcctggccaagcaccggatcgggacaaagaggcac
cgcgtttgtcttgaaatcccgcaggaggtgagtcagagcgagctcttccccaaggaggag
ctgggctccggacagtacgacatggcggagtgccaggccgccctctctcccgtgaggccc
acccacagctccgtgcgccaagtcgaggacagcctcaccttcccagattattctgactcc
actgaagttaaatttgaagaacttaaaaacgtcaagctggaagaggacgacgaggacgag
gaagaggagcatgaagcagctgtcttggacctttctgtgaacccagcttctcttggacgc
ctcgtcttctcaggctccaaagagaaatcgtcttccagcctgggctccggttcttcacag
gattctgtttcttccgattctgaaaccagcgagcctctgtcctgccgagcccaagggcag
accggagtcctcactgtgcacagctatgccagaggggatggcagggtccttccaggagag
ccgtgcgccaggaagaaagggggcgccacccggagcatcagtgagagggaattggccgag
gttgcagatgaatatatgttttccctggaagagagtaagaagtccaagggccgccgtcag
cccttaagcaagctcccccgccaccacccgctcgtgttgcaggactgcgtcagcgatgat
gagctaccagaacagctgacccccgaggaggaggctgaggagacagaggcctgggccaag
cccctgagccagctctggcagaaccgacctccaaattttgaggctgagaaagagttcaac
gaggccatggcccagcaggcccctcattgcgctgtctgcatgatctttcagacttaccat
caggtggagtttggaggttttggtcagagctgtggcagcgctccagatttggccccccag
acgcagaggaccaagccattgattccagaaatgtgcttcacctcgactggctgcagcacg
gacatcaacctgtccaccccttacctggaggaggacggcaccagcctcctggtgtcctgc
aagaagtgcagcgtccgggtccacgccagttgctacggggtaccccctgcaaaggcttct
gaagactggatgtgttctcggtgttcagccaatgccctggaagaggactgctgtttgtgc
tcattgcgaggaggagccctgcagagagccaacgatgacagatgggtccatgtctcatgt
gcggtggcgattctggaagcaagatttgtcaacattgcagaaagaagtccagtggatgtg
agcaaaattcccctgccccgcttcaaactgaaatgtgtcttctgtaagaaacggaggaaa
agaactgccggctgctgtgtgcagtgttctcacggccgttgcccaactgccttccacgtg
agctgcgctcaggctgcaggcgtgatgatgcagccagacgactggcctttcgttgtcttc
atcacctgcttccggcacaagatccctaatttggagcgtgccaagggggccttgcagagc
atcaccgcaggccagaaggtcattagcaagcataagaacgggcgcttctaccagtgtgag
gtggtaaggctcaccactgagaccttctacgaagtcaactttgatgatggctccttcagc
gacaatctctatcctgaggacatagtgagtcaggactgtctccagctgggtcctcctgct
gaaggggaagtagtccaggtgagatggacagacggccaagtctatggagccaagtttgtg
gcctcccaccccatccagatgtaccaggtggagtttgaggatggctcacagcttgtggtt
aaaagagatgacgtgtacacgctggatgaagagcttcccaagagagtcaagtctagactg
tcagtagcctcagacatgcgcttcaatgagattttcacggagaaagaggttaagcaggag
aagaaacggcaacgagttatcaactcaaggtaccgggaagattacatcgagcctgcacta
taccgggccatcatggagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (11)   
   UniProt (1)   
   RefSeq(pep) (10)   
DNA sequence (11)   
   RefSeq(nuc) (11)   
Protein domain (12)   
   Pfam (12)   
All databases (59)   

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