KEGG   Bos taurus (cow): 519526
Entry
519526            CDS       T01008                                 
Symbol
LTN1
Name
(RefSeq) E3 ubiquitin-protein ligase listerin
  KO
K22377  E3 ubiquitin-protein ligase listerin [EC:2.3.2.27]
Organism
bta  Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:bta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bta03009]
    519526 (LTN1)
   04121 Ubiquitin system [BR:bta04121]
    519526 (LTN1)
Enzymes [BR:bta01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     519526 (LTN1)
Ribosome biogenesis [BR:bta03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    519526 (LTN1)
Ubiquitin system [BR:bta04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    519526 (LTN1)
SSDB
Motif
Pfam: zf-RING_2 zf-ANAPC11 FANCL_C zf-rbx1 RINGv HipN zf-RING-like zf-RING_16
Other DBs
NCBI-GeneID: 519526
NCBI-ProteinID: NP_001179438
BGD-bta: BT13680
Ensembl: ENSBTAG00000000201
VGNC: 31078
Position
1:7183913..7242830
AA seq 1766 aa
MGGKNKQRTKGNLRPSNSGRAAELLAKEQGTVPGFIGFGTFHSDLGYVPAIQGAEEIDSL
VDSDFRMVLRKLSKKDVTTKLKAMQEFGTMCTERDTEIVKGVLPYWPRIFCKISLDHDRR
VREATQQAFEKLILKVKKHLAPYLKSLMGYWLMAQCDTYTPAASAAKDAFEAAFPPSKQP
EAIAFCKDEITSVLQDHLIKETPDTLSDPQTVPEEERDAKFYRVVTCSLLALKKLLCLLP
DNELDSLEEKFKSLLSQNKFWKYGKHSIPQIRSAYFELVSALCQRIPQLMKDEASKVSPS
VLLSIDDSDPIVCPALWEAVLYTLTTVEDCWLHVNAKKSVFPKLSAVVREGGRGLATVIY
PYLLPFISKLPQSITDPKLDFFKNFLTSLVAGLSTEKTKTSFSECSAVISAFFECLRFIM
QQNLGEEEIEEMLVNDQLIPFIDAVLKDPKLQDGQLFNHLAETLSSWEARADLEKDDKTA
RNLEKVLLNFWEKLSEICVEKINEPEADVKSVLGVSNLLQVLQKPKSSLKLNKKKVGKVR
FADEMPENNKENEKCVSSEGENSEGSELMAEPSVSPSCSDLISPLRKKPLEDLVCKLAEM
SINYVNEQKSEQHLRFLSTLLNSFSSTQVFKVLLGDEKQSTVKGKPLEIAKLVQKNPAVQ
FLYQKITGWLNEDQRKDAGFLVDILYSALCCCDSNVERKAILDDLIEVELKWNSILQIIE
KACSSSDNHALVTPWLKGDILGEKLVTLAEHLCNKDLESTVSSEPYFSERWTLLSMVLSQ
HVKNDYLIGEVYVERIIVKLHETLSKAKKLSEAENNDSSVSFICDVAYNYFSSAKGCLLM
PSSEDLLLTLFQLCAESKEKTHLPDFIISKLKNTWLSGVNLLVHRTGDTFKQSTFLRLSA
LWLKNQVQSSTLDVTSLQVLLSAVDDLLNALLESKDANLLGTYIGSVMPDNSEWEKMRQS
LPVQWLHRPLLEGRLSLNYEGFKTDFKEQDTKKLPSHLCTSALLSKMIVVALKKETVLEN
NELDKIIAELLYSLQWYEELDNPPIFLTGFCEMLQKMNITYDNLRGLGNTSGLLQLLFDR
SRKNGTLWSLIIAKLILSRSVSSDEVKQHYRRKEGFFPLTEGNMHTIQSLCPFLSKEDKK
EFIAQCIPALLAWTKEDVCHINGGFGHLAIFNSCLQTKSIDDGELLHGLLKILITWKKDH
EDIFLFSCNLSEVSPEILAVNIEIIRFLSLFLKYCSSPLAESEWDFIMCSMLAWLETTNE
NQALYSVPLVQLFAYVSCDLACELSAFFDSTTLVTTGSLPVNLISEWKEFFSPGIHSLLL
PLLVTATGENRDTSETSFQNAMLKPMCETLTYIPKDQLLSQKLPARLIAGQKTNLPEYLQ
TLLNTLAPLLLYRARPVQIAVYHMLYKLMPELPQYDQDNLKSYGDEEEEPALSPPAALMS
LLSTQEDLLENVLGCIPVGQIVTIKPLSEDFCYVLGYLLTWKLILTFFKAASSQLRALYS
MYLRKTKSLNKLLYHLFRLMPENPAFAETAVELSNKDPRTFFTEELHLGIRDTSALPYHI
PHLACSVYHMTLKDLPAMVRLWWNSSEKRVFNIVDRFTSKYVSSVLSSQEISSVQTSTQL
FNGMTVKARATTREVMATYSIEDIVIELIIQLPSNYPLGSITVESGKRVGVAVQQWRNWM
LQLSTYLTHQNGSIMEGLALWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKK
FHSACLYKWFTSSNKSTCPLCRETFF
NT seq 5301 nt   +upstreamnt  +downstreamnt
atgggcgggaagaacaagcagaggaccaaggggaatctgaggccttcaaacagtggccga
gctgcagaactccttgccaaggaacagggaacagtgcctggatttattggttttggaaca
tttcacagtgacctaggctatgttcctgctattcaaggagctgaagaaatagacagtctt
gtggattctgatttccgaatggtgctgcggaaactttctaagaaagatgtcacaacaaaa
ctaaaagctatgcaggaatttggaaccatgtgtacagaaagagacacagaaattgtaaaa
ggagttcttccatactggccaagaattttctgcaaaatttcacttgatcatgaccgccgg
gttcgagaagccacacagcaagcttttgaaaaacttatccttaaagtaaagaaacacttg
gctccttatttaaaaagtttaatgggttattggctgatggctcagtgtgatacttacaca
ccggctgcctctgcagcaaaagatgcctttgaagcagctttccctccgagcaagcaacct
gaagccatagcattttgtaaggatgaaatcacaagtgtgctacaggatcatcttatcaaa
gaaacacctgataccctcagtgacccacaaactgttccagaggaagagagagacgctaaa
ttctatcgagtcgtaacttgttccttattggcattaaagaaattgctttgcctgttacct
gataatgagcttgactctctggaggagaaatttaagtctcttttatcacagaataagttt
tggaagtatggaaaacatagtatacctcagatccgctcagcctattttgagttggtttct
gctttgtgccagcgtattccacagttgatgaaagatgaagcatccaaagtgagcccatct
gttcttcttagcatcgatgacagtgaccccattgtatgcccagctctctgggaagctgta
ctttatacacttacaactgtggaggactgttggcttcatgtaaatgcaaaaaaaagtgtg
tttcccaagctgtcagctgtggttcgtgaaggaggtcggggtctggctactgtcatatat
ccttatcttctgcccttcatcagcaaactccctcagtccattacagatccaaagttggat
ttcttcaagaattttctcacctccctagttgcagggctatcaacagaaaaaaccaaaacc
agcttttcagagtgctcagcagtgatatctgctttttttgaatgcttacgttttataatg
caacaaaacttaggggaggaagagatagaagagatgctcgtcaatgatcagttgattcct
tttattgatgcagttctcaaagacccaaagttgcaagatgggcagctatttaaccatttg
gcagaaactttaagttcctgggaagccagagccgatttggaaaaagatgataaaacagct
cgcaacttggagaaagtgctgctgaatttctgggaaaaactatcagagatctgtgttgag
aaaatcaatgagccagaagccgatgttaagtcagttttgggtgtttctaacctattgcag
gtccttcaaaagccgaagagctccttgaaattgaataaaaaaaaagttggtaaggttaga
tttgctgatgagatgcctgaaaataataaggagaatgagaaatgtgtctcctcagaggga
gagaacagtgaaggctctgagttaatggctgaaccttctgtctctccgagttgctccgac
cttatatccccgctgaggaaaaaacctttggaagacttagtctgtaaactggcagagatg
agcattaattatgtcaatgaacaaaagtcggagcaacatctcaggtttctttccaccctg
ctcaactcgttctcgtcaacccaagtgtttaaagtgctgctaggtgatgaaaaacagagc
actgtcaaaggcaagcctcttgaaatagccaaacttgtacaaaaaaatcccgcggtacaa
tttctataccagaaaataacaggttggctaaatgaagatcaaaggaaggatgccggtttc
ttggtggacattctgtacagtgccctctgttgctgtgatagtaatgtggaaagaaaagct
attctggatgatcttattgaggtagagctgaaatggaattctattcttcagatcattgaa
aaggcatgctctagttcagataatcatgctttagtaacaccttggctcaaaggagatatc
cttggagagaaattggtaaccttggcagagcatctttgtaacaaagacttggaatccaca
gtatcttctgaaccttacttctcagaaagatggactcttttaagcatggtgttatcccaa
catgttaaaaacgattacttgattggagaagtttatgttgaaagaattattgttaaactt
catgaaactttatccaaagcaaagaaattgtcagaagctgaaaataatgactcatcagtg
tcttttatctgtgatgtggcctataactatttcagctcagcgaaaggatgcttgctaatg
ccatcatctgaagatttattattaactctctttcagttatgtgctgagagcaaagaaaaa
acacatttgccagactttatcatcagtaaactgaaaaatacttggctctctggtgtgaat
ttattggttcatcgaactggtgacacatttaaacagagcaccttcctacgtttatctgct
ctgtggctgaagaaccaagttcagtcttcaactttggatgtcacaagtcttcaggtgctt
ttgtctgctgttgatgatttgctaaatgcgcttctagagagtaaagatgctaatctccta
ggaacttatattggaagcgtaatgccagacaacagtgaatgggaaaaaatgagacagtct
cttcccgtacagtggttgcataggcctcttttagaaggaagattgagtttgaattatgag
ggtttcaaaacagattttaaagagcaagatacaaagaaacttcccagccatttgtgtact
tcagcattattgagtaaaatgatagtagttgcactgaaaaaggaaacagtcctagaaaat
aatgaacttgacaaaataattgcagaactgctctattcattgcagtggtatgaagaatta
gacaatccacctattttcctaactggattttgtgaaatgcttcagaaaatgaatatcacg
tatgataacttacgtggacttggtaatacttccggccttctgcagctgttatttgacaga
tccaggaaaaacggcaccctttggtctcttattattgctaagttgatcctttcccgaagt
gtttcatctgatgaagtaaaacagcattataggagaaaagaaggtttttttccactaaca
gaaggcaatatgcatactattcaaagtctctgtccatttttgtcaaaagaagacaagaaa
gaattcattgctcagtgtatacctgcccttttggcctggaccaaggaagatgtttgccat
attaatggaggttttggacatcttgccattttcaattcttgtctgcagaccaaaagcata
gatgatggagagctattacatggtctattaaaaattctgataacatggaaaaaagatcac
gaagatatttttcttttcagttgtaatctgtcagaagtaagtccagagatactggctgta
aatatagaaataatccgtttcctttccctgtttctgaaatactgctcatctcctttggca
gagagcgaatgggacttcatcatgtgttccatgttggcttggttggagacaacaaatgag
aatcaggcactgtattctgttccacttgtacaactgtttgcctatgtcagctgtgatttg
gcctgtgaactcagcgcgttttttgattctacaactctggtcaccactggcagccttcct
gtaaatctgatcagtgaatggaaagaatttttttctcctggcatccacagtttgctttta
cctcttttggtgactgctacaggagaaaacagagatacatctgaaacatcatttcagaat
gcaatgctgaagcccatgtgtgaaacattaacttatatcccaaaggatcagctattgagt
cagaaactccctgcaagattgattgctggtcagaaaacaaacttgccagaatacctccag
actttgttaaatacattagccccattactcctttatagagctcggcctgtgcaaattgct
gtctatcatatgctatacaaattgatgcctgaactcccacaatatgatcaagataatcta
aagtcatatggagatgaagaagaagaaccagccttgtcgccaccggctgcactgatgtct
cttcttagcactcaagaggacttactagaaaatgttttgggatgtattcctgttggacag
atagttactatcaagccactgagtgaagacttctgttatgttctggggtacctcctcact
tggaaattaatacttactttcttcaaagctgcttcatctcagcttcgagctctgtattca
atgtaccttcgaaaaacaaaaagtttgaataaattgctttatcacctgttcaggcttatg
ccagaaaatccagcctttgcagagacagctgttgagctctccaataaggaccctcgaact
ttctttacagaagagctccatttgggtattagagatacctcagctcttccctaccatatt
ccacacttggcttgttcagtctatcacatgacattaaaagacttgccagccatggtcagg
ctgtggtggaacagtagtgagaagcgtgtgttcaatatcgtagatagattcaccagcaag
tatgttagcagtgttctttcttctcaagaaatatcttctgtgcaaacaagtacacagctc
tttaatggcatgacggttaaagctcgagctactactcgagaagtcatggccacttacagt
attgaggatatagtgattgaacttataatacagctgccttcaaattatccattgggctca
ataacagtggaaagtgggaaaagagttggagtggccgtgcagcagtggcgaaactggatg
cttcagctgagcacttacctcacccatcaaaatggaagtattatggaaggcttagcatta
tggaaaaataatgtagacaaacgttttgagggtgttgaagattgcatgatttgtttctca
gtcattcacggtttcaactattctcttcccaaaaaagcctgtagaacatgcaaaaaaaag
ttccattcagcttgtttgtacaaatggtttacatccagcaacaaatccacttgtccactc
tgtcgcgagacctttttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (53)   

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