KEGG   Bos taurus (cow): 529759
Entry
529759            CDS       T01008                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1 precursor
  KO
K06257  syndecan 1
Organism
bta  Bos taurus (cow)
Pathway
bta04512  ECM-receptor interaction
bta04514  Cell adhesion molecules
bta04820  Cytoskeleton in muscle cells
bta05144  Malaria
bta05205  Proteoglycans in cancer
bta05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:bta00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    529759 (SDC1)
   04514 Cell adhesion molecules
    529759 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    529759 (SDC1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    529759 (SDC1)
  09174 Infectious disease: parasitic
   05144 Malaria
    529759 (SDC1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    529759 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bta04131]
    529759 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:bta04090]
    529759 (SDC1)
   00535 Proteoglycans [BR:bta00535]
    529759 (SDC1)
Membrane trafficking [BR:bta04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    529759 (SDC1)
CD molecules [BR:bta04090]
 Proteins
  529759 (SDC1)
Proteoglycans [BR:bta00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   529759 (SDC1)
SSDB
Motif
Pfam: Syndecan Romo1
Other DBs
NCBI-GeneID: 529759
NCBI-ProteinID: NP_001069392
BGD-bta: BT26292
Ensembl: ENSBTAG00000011154
VGNC: 34378
UniProt: Q08DZ5
Position
11:78629631..78653584
AA seq 311 aa
MRRAALWLWLCALALRLQPALLHSVAVNMPPEDQDGSGDDSDNFSGSGAGALPDITSSHT
PSTWKDLGPVTTTATAPEPTSPDAIAASTTILPTGEQPEGGRAVLLAEVEPGLTAQKEAT
HPPSETTLHPTTHSVSTARATMAPGPATSHPHRDVQPDHHETSAPTGRGRMEPHRPHVEE
GGPPATEKAAEEDPSTQIPVGEGSGEQDFTFDLSGENAAGAAGEPGSRNGAPEDPEATGA
TGASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAY
QKPTKQEEFYA
NT seq 936 nt   +upstreamnt  +downstreamnt
atgaggcgcgcggcgctctggctgtggctctgcgcgctggcgctgcgcctgcagccggcc
ctcctgcacagtgtggccgtaaacatgccccccgaagatcaggatggctctggggacgac
agtgacaacttctctggctcgggcgcaggtgctttgccagatatcacctcatcacacacg
ccctccacctggaaggacctggggcccgtgacgaccacagccacggctccagagcccacc
agcccagatgccatcgccgcctccaccaccatcctgccaaccggagagcagcctgaggga
ggcagggcagtgctcctggcagaggtggagcctggcctcaccgcccagaaggaggccacc
cacccacccagtgagaccacactgcacccgaccactcacagcgtgtccacagccagagcc
accatggccccaggacccgccacctcccatccgcacagggacgtgcagcccgaccaccat
gagacctcggctcccacaggccggggccgtatggagccgcacaggccccacgtggaggag
ggaggtcctcctgccactgagaaggcggctgaggaggacccctccacccagatcccagtg
ggagagggctctggggagcaggacttcaccttcgacttgtccggggagaatgcggccggg
gccgcaggggaacctggctcacggaatggagccccggaggatcctgaggccacgggggca
acgggggcctcacagggcctcctggatcggaaggaagtcctgggaggggtcattgctgga
ggcctcgtggggctcatctttgccgtgtgcttggtgggtttcatgctgtaccggatgaag
aagaaggacgagggcagctactccttggaggagccaaaacaagccaacggcggggcctac
cagaagcccactaagcaggaggagttctacgcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (35)   

Download RDF
DBGET integrated database retrieval system