KEGG   Bos taurus (cow): 530393
Entry
530393            CDS       T01008                                 
Symbol
PKD2
Name
(RefSeq) polycystin-2
  KO
K04986  polycystin 2
Organism
bta  Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:bta00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:bta03037]
    530393 (PKD2)
   04040 Ion channels [BR:bta04040]
    530393 (PKD2)
Cilium and associated proteins [BR:bta03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   530393 (PKD2)
Ion channels [BR:bta04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   530393 (PKD2)
SSDB
Motif
Pfam: PKD_channel Polycystin_dom Ion_trans Fer4_24 EF-hand_1 EF-hand_7
Other DBs
NCBI-GeneID: 530393
NCBI-ProteinID: NP_001039777
BGD-bta: BT15888
Ensembl: ENSBTAG00000020031
VGNC: 32935
UniProt: Q4GZT3
Position
6:complement(36613501..36672178)
AA seq 970 aa
MVNSSRVQPQQPGDARRSPAPRAPGPGRLMAGGAIAGAGLAAPGGLREQRGLEIEMERIR
QAAARDPPAGASASPSPPLSSCSRQAWSRDNPGFEAEEEEEEEEVEGEEGGMVVEMDVEW
RPGSRRSASSSAVSSAGARGRGLGGYHGAGHPSGRRRQREDQGPPSPSPAGGGDPLHRHL
PLDGQHPRVAWAERLVRGLRGLWGTRLMEESSTDREKYLKSVLRELATYLLFLIVLCILT
YGMMSSSVYYYTRIMSQLFLDTPVSKMEKTNFKTLSSMEDFWKFTEGALLDGLYWKTQPS
NRTEADNRSFIYYENLLLGVPRIRQLRVRNGSCSIPLDLRDEIKECYDVYSVSSEDRAPF
GPRNGTAWIYTSEKDLNGSSHWGMIATYSGAGYYLDLSRTREETAAQVANLKKNVWLDRG
TRAIFIDFTVYNANINLFCVIRLLIEFPATGGVIPSWQFQPVKLIRYVTTFDFFLAACEI
IFCLFILYYVVEEILEIRIHKLHYFRSFWNCLDVVIIVLSVVAIGINIYRTSNVEALLQF
LEDQNTFPNFENLAYWQTQFNNIAAVIVFFVWIKLFKFINFNRTMSQLSTTMSRCAKDLF
GFAIMFFIIFLAYAQLAYLVFGTQVDDFSTFQECIFTQFRIILGDINFAEIEEANRVLGP
IYFTTFVFFMFFILLNMFLAIINDTYSEVKSDLAQQKAEMELSDLIRKGYHKALIKLKLK
KNTVDDISESLRQGGGKLNFDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQM
RDDLEKEREDLDLDHSSLPRPMSSRSFPRSLDDSEEEDDDDSGHSSRRRGSISSGVSYEE
FQVLVRRVDRMEHSIGSIVSKIDAVIVKLEIMERAKLKRREVLGRLLDGVAEDERLGRDN
EIHREQMERLVREELERWESDDAASQISHGLGTPLGLNGQPRPRSSRPSSSQSTEGMEGG
GGNGSANIHV
NT seq 2913 nt   +upstreamnt  +downstreamnt
atggtgaactcgagccgcgtgcagccgcagcagcccggggacgcaaggcgttcgccggcc
cctcgagcgccgggccccgggcggctgatggcgggcggcgcgattgccggcgccggcctc
gctgccccgggcggcctccgcgagcagaggggcctggagatcgagatggagcgcatccgg
caggcggccgcgcgggatcccccggccggagcctcggcctccccatctcctccgctctcg
tcgtgctcgcggcaggcgtggagccgcgacaacccgggcttcgaggccgaggaggaagag
gaggaagaggaggtcgagggagaagaagggggaatggtggtggagatggacgtagagtgg
cgccccggcagcaggaggtcggcctcctcctcggccgtgagctccgcgggcgcccggggc
cgggggctggggggctaccacggtgcgggccatccgagcgggaggcggcgtcagcgagag
gaccagggcccgccgagtcccagccccgccggcggcggggacccgctgcatcgccacctc
cccctggacgggcagcatccccgagtggcctgggccgagagactcgttcgcgggctgcga
ggtctctggggaacaagactcatggaggaaagcagcactgaccgagagaaataccttaaa
agtgttttacgggaactggccacatacctcctttttctcatagtcttgtgcatcttgacc
tatgggatgatgagctctagtgtgtactactacacccggatcatgtcacaactcttcctg
gacaccccagtgtccaaaatggagaaaactaactttaaaactctttcttcaatggaagac
ttctggaagttcacagaaggcgccttgttggatgggctctactggaagacgcagcccagc
aacagaacagaagccgacaaccgaagcttcatctactatgagaacctcctgttaggggta
ccacgtatacggcaactcagagtcagaaatggatcctgttccatccccctggacttgaga
gatgagattaaagagtgctatgatgtgtactccgtcagcagtgaagaccgggctccgttc
ggtcctagaaatggaacggcttggatctacacaagtgaaaaagacttgaatgggagtagc
cactggggaatgattgcaacttatagtggagctggttattacctggatttgtcaagaacg
agagaggaaacagccgctcaggttgctaacctcaagaaaaatgtctggctggaccgagga
accagggcaatttttattgactttacagtgtacaacgccaacattaacctgttctgcgtg
atcaggttactgatcgaattcccagcaacaggaggtgtgatcccatcttggcaatttcag
cctgtaaagctgatccgctatgttacaacttttgatttcttcctggcagcctgtgagatt
atcttttgtttatttatcctttactatgtggtggaagagatattggaaattcgcattcac
aagctacactatttcaggagtttctggaattgtctggatgttgtgatcattgtgctatca
gtggtcgctataggaattaacatatacagaacatcaaatgtggaagctctgctacagttt
ctagaagatcaaaatactttccccaacttcgagaatctggcatactggcaaacacagttc
aacaacatagctgctgtcatagtgttttttgtctggattaagctcttcaaatttatcaac
tttaacaggaccatgagtcagctctctacaaccatgtctcggtgtgccaaagacctcttt
ggctttgcgattatgttcttcattattttcttagcatatgctcagttggcataccttgtc
tttggcactcaagttgatgacttcagtactttccaagagtgtatcttcactcaattccgt
atcattttgggtgatatcaacttcgcagagattgaggaagctaatcgagttttgggacca
atttatttcactacatttgtgttctttatgttcttcattcttttgaatatgtttttggcc
atcatcaatgatacttactctgaagttaaatctgatttggcccagcagaaagctgagatg
gaactctcggatcttatcagaaagggttaccataaagccttgatcaaactaaaactgaag
aaaaatactgtggatgacatttcagagagtctgcggcaagggggaggcaagttaaacttt
gatgaacttcggcaagatctcaaagggaaaggccatactgatgcagagattgaggcaata
ttcacaaaatatgaccaggatggagaccaggaactgactgaacatgagcaccagcagatg
cgagacgacttggaaaaagagagggaggacctggacttggatcacagctctttaccacga
cccatgagcagccgaagtttccctcgaagcctggatgactctgaagaggaagatgacgac
gacagtgggcatagctccagaaggaggggcagcatctccagtggggtttcttatgaagag
tttcaagtcctagtgagacgagtggaccgaatggagcactccatcggcagcattgtgtcc
aagattgatgctgtgatagtgaagcttgagatcatggagcgggccaaactgaagagaagg
gaggtgctgggaaggctgctggatggagtggctgaggatgaaaggctgggtcgtgacaat
gaaatccacagggaacaaatggaacggcttgtgcgagaagagttggaacgctgggagtct
gatgatgcagcttcccaaataagtcatggtttaggcacacccttaggactaaatggtcag
ccacgccccaggagctctcgcccttcttcctcccagtctacagaaggaatggaaggtgga
ggtggaaacgggagtgccaatattcatgtgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (58)   

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