KEGG   Bos taurus (cow): 533336
Entry
533336            CDS       T01008                                 
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
  KO
K10615  E3 ubiquitin-protein ligase HERC4 [EC:2.3.2.26]
Organism
bta  Bos taurus (cow)
Pathway
bta04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    533336 (HERC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bta04121]
    533336 (HERC4)
Enzymes [BR:bta01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     533336 (HERC4)
Ubiquitin system [BR:bta04121]
 Ubiquitin ligases (E3)
  HECT type E3
   533336 (HERC4)
SSDB
Motif
Pfam: RCC1 HECT RCC1_2
Other DBs
NCBI-GeneID: 533336
NCBI-ProteinID: NP_001070362
Ensembl: ENSBTAG00000014029
VGNC: 55988
UniProt: Q08DB6 E1BAV2
Position
28:complement(24436931..24564423)
AA seq 1057 aa
MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG
SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS
PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR
TQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIA
CGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPDFDSEE
YFCVKRIFSGGDQSFSHYSNPQNCGPPDDFRYPDPSKQIWTVNEALIQKWLSYPSGRFPV
EIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQIAQ
QVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTALVNLEKAP
LKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEIL
HRVNEKSGQIIQYDKFYIHEVQELIDIRNDYIIWVQQQAYGMDVNHGLTELADIPVTICT
YPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPCLILVVRRENIVG
DAMEVLRKTKNIDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSR
LIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKKLLKKKPSLEDLKELVPD
VGRSMQQLLDYPEDDVEETFCLNFTITVENFGATEVKELVLNGADTAVNKQNRQEFVDAY
VDYIFNKSVASLFDAFHAGFHKVCGGKVLQLFQPNELQAMVIGNTNYDWKELEKNTEYKG
EYWAEHPTIKMFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLILVIQSTGGGEEYLP
VSHTCFNLLDLPKYTDKETLRSKLIQAIDHNEGFSLI
NT seq 3174 nt   +upstreamnt  +downstreamnt
atgttgtgctggggaaatgcttcttttggacagctaggtttgggtggaattgatgaagaa
attgtactagagcccagaaaaagtgacttttttataaataaaaaggttcgagatgtagga
tgtggactcagacatactgtatttgttctggatgatggaacagtgtacacgtgtggatgt
aatgatctagggcagctaggtcatgaaaaatccagaaagaaaccagagcaggttgttgcc
ctggatgcccaaaatattgtagctgtttcatgtggagaagctcatacattagcactaaat
gacaagggccaggtgtatgcttggggtctcgattctgatggacaacttggcctgctagga
tcagaggaatgtatcagagtacccagaaatattaaaagtttgtcggatatccagatagta
caggttgcttgtggttactatcattcacttgcactttctaaagcaagtgaagtcttctgt
tggggacagaataaatatggccaattgggtttaggcattgactgtaaaaagcaagcttca
ccacagctgattaagtctttacttggaatccctttcatgcaaattgcggctggaggagcc
catagttttgtactcaccctttctggagctatctttggatggggacgcaacaaatttggt
caactaggtcttaatgatgaaaatgataggtatgttcctaatttactaaagtcactaaga
actcagaaaatagtttatatttgttgtggagaagatcatactgctgcactaaccaaggaa
ggcggagtgtttacttttggagccggagggtatggtcagttgggtcataactctaccagt
catgaaataaacccaaggaaagtttttgaacttatgggaagcattgtcactcagattgct
tgtggaaggcagcacacttctgcttttgttccttcatcaggacgaatttattcttttgga
cttggtggtaatggacagctaggaactggttcaacaagcaacaggaaaagtcctttcact
gtgaaaggaaactggtttccttataatgggcagtgtccaccagattttgattctgaagaa
tatttctgcgtgaaaagaattttctcaggtggagatcaaagcttttcacattattctaat
ccccagaactgtgggccaccagatgactttagatatcctgatccttcgaagcagatctgg
actgtgaatgaagctttaattcaaaaatggctcagctacccctctggaagatttcctgta
gagatagccaatgaaattgatggaacattttcttcatctggttgtctaaatggaagtttt
ttagctgttagcaatgatgatcactatagaacgggcactagattttcaggggttgacatg
aatgctgctagacttttattccacaaacttatacaacctgatcatcctcagatagctcag
caggtggcagctagcttggaaaagaatcttattcctaaactgactagctccttacctgat
gttgaagcattgagattttatcttactctaccagaatgtcccctgatgagcgattccaac
aatttcaccacaatagcaattccctttggtacagctcttgtgaacttagaaaaggcaccg
ctgaaagtacttgaaaactggtggtcagtacttgaacctccgctattcctcaagattgta
gaactttttaaggaggttgtggtacatcttttgaaactctacaagatcggcattccccct
tctgagagaagaattttcaacagttttcttcatactgcattaaaggttttagaaatatta
catagggtaaatgagaaatctggacagattattcaatatgataaattttatatacatgaa
gtacaagaattgatagacatacggaatgattatatcatctgggtccaacagcaggcctat
ggaatggatgtcaaccatggattaactgagttggcagatatcccggttacaatctgcaca
tatccatttgtatttgacgcccaagcaaaaactactctgttacaaacagatgcagtctta
cagatgcagatggctattgaccaggcccacagacagaatgtctcctctctttttctccca
gtgattgaatctgtgaacccttgcctaattctagtggtacgtagggaaaatattgtagga
gatgcaatggaagtccttaggaaaacaaaaaatatagactacaaaaagccactcaaggtt
atatttgttggagaagatgctgttgatgcaggaggggtacgcaaagaatttttcttgctt
atcatgagggaattattggatcctaaatatggcatgtttaggtattacgaagattccaga
ctcatttggttttctgataagacatttgaagacagtgatttattccacttaattggtgtt
atctgtggattagcaatttataattttactattgtggacctccattttcctttggcttta
tataagaaactgctaaaaaagaagccatccctggaagatttgaaagaactggtccctgat
gttgggagaagcatgcaacagttactggactatcctgaagatgatgttgaagagacattt
tgtcttaattttacgatcacagttgaaaactttggtgcaacagaagtgaaagaactggtt
ctaaatggtgcagacacagctgttaacaaacaaaatcgacaagagtttgttgatgcttat
gtggattacatattcaataaatcagtggcttccttatttgatgcttttcatgcgggcttt
cataaggtctgtggaggaaaagtccttcagctctttcagcctaatgaactacaagcaatg
gttattggaaacacaaattatgattggaaggaattggaaaagaatacagaatacaaagga
gaatattgggcagaacatcctacaataaaaatgttctgggaagtatttcatgaattacca
ttggaaaagaaaaaacaatttttgttatttttgacaggtagtgatcgcattcctattctt
ggtatgaagagtctaatactagtcatccagtcaacaggaggtggtgaggagtatctccca
gtttcccatacctgttttaatcttctggatcttccaaaatatacagacaaagaaactcta
cgctctaaactgattcaagctattgatcacaatgaaggcttcagtttaatataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (9)   
   UniProt (2)   
   RefSeq(pep) (7)   
DNA sequence (13)   
   RefSeq(nuc) (7)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (46)   

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