KEGG   Bos taurus (cow): 535415
Entry
535415            CDS       T01008                                 
Symbol
HDAC9
Name
(RefSeq) histone deacetylase 9 isoform X3
  KO
K11409  histone deacetylase 9 [EC:3.5.1.98]
Organism
bta  Bos taurus (cow)
Pathway
bta04613  Neutrophil extracellular trap formation
bta05034  Alcoholism
bta05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:bta00001]
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    535415 (HDAC9)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    535415 (HDAC9)
  09165 Substance dependence
   05034 Alcoholism
    535415 (HDAC9)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bta03036]
    535415 (HDAC9)
Enzymes [BR:bta01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     535415 (HDAC9)
Chromosome and associated proteins [BR:bta03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     535415 (HDAC9)
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Other DBs
NCBI-GeneID: 535415
NCBI-ProteinID: XP_005205295
Ensembl: ENSBTAG00000003808
VGNC: 50614
Position
4:26685125..27674074
AA seq 1088 aa
MHNRTDGVAGREQLLAQQRMHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVV
REKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQE
LLEKEQKLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATK
DTPTNGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGTPPSYKYTLPGAQDAKDDFPLRKT
ASEPNLKVRSRLKQKVAERRSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSP
NNGPTGNITENETSVLPPTPHAEKMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVS
TQLNASNSLKEKQKCETQTLRQGVPLPGQYGGSIPASSSHPHVTLEGKPNSSHQALLQHL
LLKEQMRQQKLLVAGGVPLHPQSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTL
AQLVIQQQHQQFLEKQKQYQQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQEDR
APSSGHSTRRDSGACADDTLGQAGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQQSFLE
PQHTRAVSVRQAQLAPVGMEGLEKERLVSKTHSSPAASTLPHPAMDRPLRPGSATGIAYD
PLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHSEHH
SLLYGTNPLDGQKLDPRTLLGDSSQKFFSSLPCGGLGVDSDTIWNELHSSGAARMAVGCV
IELASRVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVD
LDVHHGNGTQQAFYADPNILYISLHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTGGL
DPPMGDIEYLEAFRTVVKPVATEFDPDMVLVSAGFDALEGHAPPLGGYKVTAKCFGHLTK
QLMTLADGHVVLALEGGHDLTAICDASEACVNALLGNELEPLAEDVLHQTPNMNAVISLQ
KIIEIQSKYWKSVRMVAMPRGCALAGAQLQEETETVSALASLTVDVEQPFAQEDNRTAGE
PMEEEPAL
NT seq 3267 nt   +upstreamnt  +downstreamnt
atgcacaaccgaacggatggggtggctggacgagagcagctcttggctcagcagagaatg
cacagtatgatcagctcagtcgatgtgaagtcagaggttcctgtgggcctggagcccatc
tcgcctttagacctaaggacagacctcaggatgatgatgcccgtggtggaccctgttgtc
cgtgagaagcaactgcagcaggagttactcctcatccagcaacagcagcagatccagaag
cagcttttgatcgcagagtttcagaagcagcatgagaacttgacacggcagcaccaggct
cagcttcaggagcatatcaagttgcaacaggaacttctagccataaaacagcagcaagaa
ctgctagaaaaggagcagaaactggagcagcagaggcaagaacaggaagtagagaggcat
cgcagagaacagcagcttcctcctctcagaggcaaagatagaggacgagaaagggcagtg
gcaagtacagaagtaaagcagaagcttcaagaattcctgttgagtaaatcagcaacaaaa
gacactccaactaatggaaaaaatcattccgtgagccgccatcccaagctctggtacacg
gctgcccaccacacgtcattggatcaaagctctccacccctgagtggaacacctccatcc
tacaaatacacattacctggagcacaagatgcaaaggatgatttcccccttcgaaaaact
gcctctgagcccaacttgaaggtgcggtccaggttaaaacagaaagtggcagagaggaga
agcagccccttactcaggcggaaggatggaaatgttgtcacttcattcaagaagcgaatg
tttgaggtgacagaatcttcagtcagtagcagttccccaggatctggtcccagttcacca
aacaatggtccaactggaaatattactgaaaatgagacttcagttttgccacctactcct
catgctgagaaaatggtttcacagcaacgcattctaattcacgaagattccatgaaccta
ctcagtctttatacatctccgtctttgcccaacatcaccctgggtcttccagcagtgtca
acccagctcaatgcttcaaattcactcaaggaaaaacagaagtgtgagacccagacactc
aggcaaggtgttcctctgcctgggcaatacgggggcagcatcccggcgtcttcaagccat
ccccacgttactttggagggaaagcccaacagcagccaccaagctctcctacagcatcta
ttattgaaagaacaaatgcgacagcaaaaacttcttgtggctggtggagttcccttacat
cctcagtctcccttggcaacaaaagagagaatttcacccggcattagaggtacccacaaa
ttaccccgacacagacccctgaatcgaacccagtctgcacctttgcctcagagcaccttg
gctcagctggtcattcagcagcagcaccagcagttcttggagaagcagaagcaataccag
cagcagatccacatgaacaagctgctttcgaagtctattgaacaactgaagcaaccaggc
agtcacctcgaggaagcggaggaagagcttcagggggaccaagcgatgcaggaagacaga
gcgccctctagtggccacagcactaggcgtgacagcggtgcttgtgcggatgacacattg
ggacaagctggtgctgtgaaggtcaaggaggaacccgtggacagtgatgaagatgctcag
atccaggaaatggaatctggggagcaggctgcttttatgcaacagcagtccttcttggag
ccccagcacacacgtgcagtctcggtgcgccaggctcagctggctcctgtgggcatggag
ggattagagaaagagcgtctggtctccaagacccactcctcccctgcagcctccacgtta
cctcacccagcaatggaccgccccctccggcccggctctgcaactggaattgcctatgat
cctttgatgctgaaacaccagtgcatttgtggcaattccaccacccaccctgagcatgct
ggacgaatacagagcatctggtcacggctgcaagaaactgggctgctaaataaatgtgag
cgaattcaaggtcgaaaagccagcctggaggaaatacagcttgttcattccgaacatcac
tcactgttgtatggcaccaaccccctggacggacagaagctggaccccaggacactccta
ggtgactcctctcaaaagtttttttcttcattaccatgtggtggacttggggtggacagt
gacaccatttggaatgagctgcactcgtccggcgctgcacgcatggctgttggctgtgtc
atcgagctggcttccagagtggcctccggagagctgaagaatggatttgctgtggtgagg
cccccaggccatcatgctgaggaatccacagccatggggttctgcttttttaattcagtt
gcaattaccgccaaatacttgagagaccaactaaatataagcaagatattgattgtagat
ctggatgttcaccatggaaatggtacacagcaagccttttatgctgaccccaacatcctg
tatatttcactccatcgctatgatgaagggaactttttccctggcagtggagccccaaat
gaggttggaacaggccttggagaaggatacaatataaatattgcctggacaggtggcctt
gatccccccatgggagatattgagtaccttgaagcattcagaactgtagtgaagcctgtg
gccacagagtttgatccagacatggtcctggtttctgctggatttgatgcattagaaggc
cacgcccctcctctgggggggtacaaagtgactgcaaaatgctttggccatttgacgaag
cagttgatgacactggctgatggacatgtggtgttggctctagaaggaggacatgatctc
acagccatctgcgatgcatcagaagcctgtgtaaatgcccttctaggaaatgagctggag
ccacttgcagaagatgttctccaccaaactccaaatatgaatgccgttatttctctacag
aagatcattgaaattcaaagcaaatactggaagtcggtaaggatggtggcgatgccaagg
ggctgtgctctggctggggcccagctgcaagaggagacagagactgtttctgccctggcc
tccctgacagtggacgtggaacagccctttgctcaagaagacaacagaactgctggtgag
cctatggaagaggagccagccttgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (10)   
   RefSeq(pep) (10)   
DNA sequence (11)   
   RefSeq(nuc) (11)   
Protein domain (2)   
   Pfam (2)   
All databases (53)   

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