KEGG T01008: 535415

Bos taurus (cow): 535415

Entry

535415 CDS T01008

Gene name

HDAC9

Definition

histone deacetylase 9

Orthology

K11409

histone deacetylase 9 [EC:3.5.1.98]

Organism

bta Bos taurus (cow)

Pathway

bta05034	Alcoholism
bta05203	Viral carcinogenesis

Class

Human Diseases; Cancers; Viral carcinogenesis [PATH:bta05203]
Human Diseases; Substance dependence; Alcoholism [PATH:bta05034]

SSDB

Motif

Pfam:

HDAC4_Gln

Other DBs

NCBI-GI:

359064572

NCBI-GeneID:

535415

Position

AA seq 620 aa
MLQTIYETDSCFSSDGVAGREQLLAQQRMHSMISSVDVKSEVPVGLEPISPLDLRTDLRM
MMPVVDPVVREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQE
LLAIKQQQELLEKEQKLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQE
FLLSKSATKDTPTNGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGTPPSYKYTLPGAQDA
KDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGNVVTSFKKRMFEVTESSVSSS
SPGSGPSSPNNGPTGNITENETSVLPPTPHAEKMVSQQRILIHEDSMNLLSLYTSPSLPN
ITLGLPAVSTQLNASNSLKEKQKCETQTLRQGVPLPGQYGGSIPASSSHPHVTLEGKPNS
SHQALLQHLLLKEQMRQQKLLVAGGVPLHPQSPLATKERISPGIRGTHKLPRHRPLNRTQ
SAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQ
GDQAMQEDRAPSSGHSTRRDSGACADDTLGQAGAVKVKEEPVDSDEDAQIQEMESGEQAA
FMQQVIGKDLAPGFVIKVII

NT seq 1863 nt +upstreamnt +downstreamnt
atgctgcagacaatttacgagactgactcgtgtttttcttcagatggggtggctggacga
gagcagctcttggctcagcagagaatgcacagtatgatcagctcagtcgatgtgaagtca
gaggttcctgtgggcctggagcccatctcgcctttagacctaaggacagacctcaggatg
atgatgcccgtggtggaccctgttgtccgtgagaagcaactgcagcaggagttactcctc
atccagcaacagcagcagatccagaagcagcttttgatcgcagagtttcagaagcagcat
gagaacttgacacggcagcaccaggctcagcttcaggagcatatcaagttgcaacaggaa
cttctagccataaaacagcagcaagaactgctagaaaaggagcagaaactggagcagcag
aggcaagaacaggaagtagagaggcatcgcagagaacagcagcttcctcctctcagaggc
aaagatagaggacgagaaagggcagtggcaagtacagaagtaaagcagaagcttcaagaa
ttcctgttgagtaaatcagcaacaaaagacactccaactaatggaaaaaatcattccgtg
agccgccatcccaagctctggtacacggctgcccaccacacgtcattggatcaaagctct
ccacccctgagtggaacacctccatcctacaaatacacattacctggagcacaagatgca
aaggatgatttcccccttcgaaaaactgcctctgagcccaacttgaaggtgcggtccagg
ttaaaacagaaagtggcagagaggagaagcagccccttactcaggcggaaggatggaaat
gttgtcacttcattcaagaagcgaatgtttgaggtgacagaatcttcagtcagtagcagt
tccccaggatctggtcccagttcaccaaacaatggtccaactggaaatattactgaaaat
gagacttcagttttgccacctactcctcatgctgagaaaatggtttcacagcaacgcatt
ctaattcacgaagattccatgaacctactcagtctttatacatctccgtctttgcccaac
atcaccctgggtcttccagcagtgtcaacccagctcaatgcttcaaattcactcaaggaa
aaacagaagtgtgagacccagacactcaggcaaggtgttcctctgcctgggcaatacggg
ggcagcatcccggcgtcttcaagccatccccacgttactttggagggaaagcccaacagc
agccaccaagctctcctacagcatctattattgaaagaacaaatgcgacagcaaaaactt
cttgtggctggtggagttcccttacatcctcagtctcccttggcaacaaaagagagaatt
tcacccggcattagaggtacccacaaattaccccgacacagacccctgaatcgaacccag
tctgcacctttgcctcagagcaccttggctcagctggtcattcagcagcagcaccagcag
ttcttggagaagcagaagcaataccagcagcagatccacatgaacaagctgctttcgaag
tctattgaacaactgaagcaaccaggcagtcacctcgaggaagcggaggaagagcttcag
ggggaccaagcgatgcaggaagacagagcgccctctagtggccacagcactaggcgtgac
agcggtgcttgtgcggatgacacattgggacaagctggtgctgtgaaggtcaaggaggaa
cccgtggacagtgatgaagatgctcagatccaggaaatggaatctggggagcaggctgct
tttatgcaacaggtaataggcaaagatttagctccaggatttgtaattaaagtcattatc
tga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (12)   
   RefSeq(pep) (12)   
DNA sequence (12)   
   RefSeq(nuc) (12)   
Protein domain (1)   
   Pfam (1)   
All databases (33)   

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