KEGG   Bos taurus (cow): 538366
Entry
538366            CDS       T01008                                 
Symbol
SNX18
Name
(RefSeq) sorting nexin-18
  KO
K17923  sorting nexin-9/18/33
Organism
bta  Bos taurus (cow)
Pathway
bta05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:bta00001]
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    538366 (SNX18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bta04131]
    538366 (SNX18)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:bta04990]
    538366 (SNX18)
Membrane trafficking [BR:bta04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    538366 (SNX18)
  Macropinocytosis
   Sorting nexins
    538366 (SNX18)
Domain-containing proteins not elsewhere classified [BR:bta04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   538366 (SNX18)
SSDB
Motif
Pfam: BAR_3_WASP_bdg PX SH3_9 SH3_2 SH3_1 Vps5 BAR XFP HBM
Other DBs
NCBI-GeneID: 538366
NCBI-ProteinID: NP_001077200
BGD-bta: BT28841
Ensembl: ENSBTAG00000027924
VGNC: 35098
UniProt: A4IFN6
Position
20:complement(24546478..24575118)
AA seq 626 aa
MALRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGINSRGDRGLFPASYVQVIR
APEPGPAGDGGPGAPARYANVPPGGFEPLPAAPPTSFKPPPEAFQPLLQPQQAPPVSTFQ
PTGAGFSYGGSALQPSPQQLYGGGGYQASQGSDDDWDDEWDDSSTVADEPGALGSGAYPD
LDGSSSGGVGAAGRYRLSTRSDLSLGSRSGSAPPQHHPSGAKSSATVSRNLNRFSTFVKS
GGEAFVLGEASGFVKDGDKLCVVLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMKSYISY
KLVPTHTQVPVHRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEEDFISKRRKGLIW
WMNHMASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAA
LDLQEVESKIEGFKCFTKKMDDSALQLNHTANEFARKQVTGFKKEYQRVGQSFRGLSQAF
ELDQQAFSAGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFPDIIHV
QKGALTKVKESRRHVEEGKMEVQKADGIQDRCNTISFATLAEIHHFHQIRVRDFKSQMQH
FLQQQIIFFQKVTQKLEEALHKYDSV
NT seq 1881 nt   +upstreamnt  +downstreamnt
atggcgctgcgcgcccgggcgctctacgacttcaggtcggagaacccgggcgagatctca
ctgcgggagcacgaggtgctgagcctgtgcagcgaacaggacatcgagggctggctcgag
gggatcaacagccgcggagaccgcggcctcttcccggcctcttacgtgcaggtgatccgc
gcccccgagcccggcccggcgggcgacggcggcccgggcgccccggcccgctacgccaac
gtgccacccgggggcttcgaacccctgcctgccgcgccgcccacctctttcaagccgccg
cccgaagccttccagcccctgctgcaaccgcagcaggcgccgccggtgagcaccttccag
ccgacgggcgcgggcttctcgtacggcgggagcgccctgcagccgtcgccgcagcagctc
tacggcggcggcggctaccaggccagccagggcagcgacgatgactgggatgatgagtgg
gacgacagctccaccgtggctgacgagccgggcgcactggggagcggcgcttacccggac
ctcgacggctcgtcgtctgggggcgtcggcgctgctggccgctaccgcctgtccacgcgc
tccgacttgtcgctgggctcccgcagcggctctgcgcccccgcagcaccatccgtcaggg
gccaagagctcggccaccgtgagccgtaacctcaaccgcttctccaccttcgtcaagtct
ggcggggaggctttcgtgctgggtgaggcatcgggcttcgtgaaggatggggacaagctg
tgcgtggtgctgggcccctatggccccgagtggcaggagaacccctatcccttccagtgc
accatcgacgaccccaccaagcagaccaagttcaagggcatgaagagctacatctcgtac
aagcttgtgcccacgcacacgcaggtgccggtgcaccggcgctacaagcacttcgactgg
ctgtatgcgcgcctggccgagaagttcccggtcatctcggtgccccacctgcccgagaag
caggccaccggccgcttcgaggaggacttcatctccaagcgcagaaagggcctcatctgg
tggatgaaccacatggccagccacccggtgctggcgcagtgcgacgtcttccagcacttc
ctgacctgccccagcagcaccgacgagaaggcctggaagcagggtaagaggaaggccgag
aaggatgagatggtgggcgccaacttcttcctgaccctgagcacgccccccgccgccgcc
ctcgacctgcaggaggtggagagcaagatcgaaggcttcaagtgcttcaccaagaagatg
gacgacagcgcgctgcagctcaaccacacagccaacgagttcgcgcgcaagcaggtgacc
ggcttcaagaaggagtaccagagggtggggcagtccttccgcggcctcagccaggccttt
gagctggaccagcaggccttctcggccggcctgaaccaggccatcgccttcaccggagat
gcctacgatgccatcggcgagctcttcgccgagcagcccaggcaagacctggacccggtc
atggacctgttggcgttgtatcagggccacctggccaacttccccgacatcatccacgtc
cagaaaggagctcttaccaaagtaaaggagagtaggcgacacgtggaagaagggaagatg
gaagtccaaaaggctgatggcattcaggatcgctgtaacactatttcttttgctactttg
gctgaaattcaccacttccatcaaattcgagtaagagactttaaatcacaaatgcagcat
ttcttacaacaacaaataatatttttccaaaaagtgacgcagaagttggaagaggctctt
cacaaatatgatagtgtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (33)   

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