KEGG   Bos taurus (cow): 540756
Entry
540756            CDS       T01008                                 
Symbol
NGEF
Name
(RefSeq) ephexin-1
  KO
K07525  neuronal guanine nucleotide exchange factor
Organism
bta  Bos taurus (cow)
Pathway
bta04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:bta00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    540756 (NGEF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bta04131]
    540756 (NGEF)
Membrane trafficking [BR:bta04131]
 Others
  Rho GTPase associated proteins
   Rho guanine nucleotide exchange factors (GEFs)
    540756 (NGEF)
SSDB
Motif
Pfam: RhoGEF SH3_1 SH3_9 SH3_2 PH SH3_16
Other DBs
NCBI-GeneID: 540756
NCBI-ProteinID: NP_001070394
BGD-bta: BT22300
Ensembl: ENSBTAG00000008942
VGNC: 32060
UniProt: Q08DA6
Position
3:complement(112609160..112737272)
AA seq 616 aa
MELLAAAFNAACAVDHDSSTSESDARDSAAGHLPGSESSSTPGNGATPEEFPALADSPTT
LTEALQMIHPIPADSWRNLIEQIGLLYQEYRDKSTLQEIETRRQQDAEIQGAADGCPSSE
EAPEEDEGEEEEPASPPERKALPQICLLSNPHSRFNLWQDLPEIQSSGVLDILQPEEIRL
QEAMFELITSEASYYKSLNLLVSHFMENERLKKILHPSEAHILFSNVLDVMAVSERFLLE
LERRMEENIVISDVCDIVYRYAADHFSVYITYVSNQTYQERTYKQLLQEKAAFRELIAQL
ELDPKCRGLPLSSFLILPFQRITRLKLLVQNILKRVEERSEREGTALDAHKELELVVKAC
NEGVRKMSRTEQMISIQKKMEFKIKSVPIISHSRWLLKQGELQQMSGPKTSRTLRTKKLF
REIYLFLFNDLLVICRQIPGDKYQVFDSAPRGLLRAEELEDQGQTLANVFILRLLENSDD
REATYMLKASSQSEMKRWMTSLAPNRRTKFVSFTSRLLDCPQVQCVHPYVAQQPDELTLE
LADILNILDKTEDGWIFGERLHDQERGWFPSNMTEEILNPKIRSQNLKECFRVHKMDDPQ
RSQNKDRRKLGSRNRQ
NT seq 1851 nt   +upstreamnt  +downstreamnt
atggagctgctggccgcagccttcaacgccgcctgcgccgtggaccacgacagctccacc
tcggagagcgacgcgcgcgactcagcggcgggacacctgcccggcagcgagtcgtcctct
accccaggaaatggggctacgcccgaggagttcccggccctcgcagacagccccaccacg
ctcaccgaggccttgcagatgatccaccctattcccgccgactcctggagaaacctcatt
gaacaaatagggctcctgtatcaggaataccgagataaatcaactctccaagagattgag
accaggaggcaacaggatgcagaaatacaaggtgctgctgacgggtgcccatccagcgag
gaggctccagaggaagatgaaggggaggaggaggaaccagcaagcccacctgagaggaag
gccctgccccagatctgcctgctcagcaacccccactcgagattcaacctctggcaggat
ctcccggagattcagagcagcggggtgctggacatcctccagccggaggagatcaggctg
caagaggccatgttcgagctcatcacttctgaggcctcctactataaaagcctgaacctt
ctggtgtcccacttcatggagaacgagcggctgaagaagatcctgcacccgtctgaggcc
cacatcctcttctccaacgtgctggatgtcatggccgtcagtgagcggtttctgttggag
ctggagcgccggatggaggaaaacatcgtcatctcggacgtgtgtgacatcgtgtaccgc
tacgccgctgaccacttctccgtctacatcacctacgtcagcaaccagacctaccaggag
cggacctataagcagctgctccaggagaaggcagccttccgggagctgatcgcgcagctg
gagttggaccccaagtgcagggggctgcccctctcctccttcctcatcctgcctttccag
aggatcacgcgcctcaagctgttggtccagaacatcctgaagagggtggaggaaaggtct
gagcgcgaaggcaccgccttggacgcccacaaggaactggagctggtggtgaaagcatgc
aacgagggcgtcaggaagatgagccgcacggagcagatgatcagcatccagaagaagatg
gagttcaagatcaagtcggtgcccatcatctcacactcccgctggctgctgaagcagggc
gagctgcagcagatgtccggccccaagacctcgcggaccctgcggaccaagaaactcttc
cgggagatttacctctttctcttcaacgacctgctggtgatttgccggcagattccagga
gacaagtaccaggtgtttgactcggccccgcgaggcctgctgcgcgcggaggaactggag
gaccagggccagacgctggccaacgtcttcatcctacggctgctcgagaactcagacgat
cgggaggccacttacatgctgaaggcgtcctctcagagcgagatgaagcgctggatgacc
tcgctggcccccaaccgaagaactaagttcgtttccttcacgtcccggctgctcgactgc
ccccaggtccagtgtgtgcacccgtatgtggcccagcagccggatgagctgacgctggag
ctggccgacatcctcaacatcctggacaagacagaggacggctggatctttggcgagcgt
ctgcatgaccaggagcgaggctggttccccagcaatatgaccgaggagatcttgaacccc
aagatccggtcccagaacctcaaggagtgtttccgtgtccacaagatggacgaccctcag
cgcagccagaataaggaccgcaggaagctgggcagccggaatcggcaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system