KEGG   Bos taurus (cow): 781067
Entry
781067            CDS       T01008                                 
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C
  KO
K11449  jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
bta  Bos taurus (cow)
Pathway
bta05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:bta00001]
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    781067 (JMJD1C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bta03036]
    781067 (JMJD1C)
Chromosome and associated proteins [BR:bta03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    781067 (JMJD1C)
SSDB
Motif
Pfam: JmjC C1_2 zf-C5HC2 FYVE
Other DBs
NCBI-GeneID: 781067
NCBI-ProteinID: NP_001178051
BGD-bta: BT15034
Ensembl: ENSBTAG00000001573
VGNC: 30376
UniProt: F1N685
Position
28:complement(19314348..19630515)
AA seq 2534 aa
MAVETRPELVGKRFLCLALGEEARLERGESGRCWRGWRAGVIRAVSHRDSRNPDLAVYVE
FDDLEWDKREWVKVYEDFSTFLVEYHLIWARRINPSQTQGSKSKQIQWPALTFKPLVEKS
VPSSITAVEFLVDKQLDFLTEDSAFQPYQDDIDSLNPVLRDNPQLQEEVKVWVKEQKVQE
IFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQM
TFLDDVVHSLLKGENIGITSRRRSRASQNSNTVHGHYTRAQANSPRPAMNSQTAVPKQNS
HQQQRNIRPNKRKGSDSSIPDEEKMKEEKYDYIARGENPKGKKQVMNKRRKAEEDEKKLN
MKRLRTDNVSDFSESSDSENSNKRIINNSSEQKPENELKNKNTSKINGEEGKSQNNEKAE
ETLIDSQHPWDQIQEDKKHEETEKQKSVDFQRQEKMIIHSSEQATLSDHNSSDLLLQERN
TEKTHTMELLPKEKFVSRPPTPKCVIDITNDTNTEKVAQETSSSTFGLQTLQKMDPNVSD
SKHSIANTKYLETGNQDSDQNWVSDVVKVDLTQSNVRNASSGNENLSMEKEKNQYVSYLS
SLSAVSVTEDKLHKRSPPPETIKSKLNTSVDAPKTKSNPSPEVVKPKVNHSPDSVKSKAT
YANSQAAGERRPANKIEHELSRCSFHPVPTRGSTLETTKSPLIIDKNEHFTVYRDPALIG
SDTGANHISPFLSQHPFPLHSSSHRTCLNPGTHHPALTPAPHLLAGSSSQTPLPTINTHP
LTSGPHHSVHHPHLLPTVLPGVPTASLLGGHPRLETAHASSLSHLALAHQQQQQLLQHQS
PHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSKWVHPENAVNAEPSLRRNSPS
PWLHQPTPVTSADGIGLLSHIPVRPSSAEPHRPLKIAAHSSPPLTKCLVDHHKEELERKA
FIEPLRSVASTSAKNDLDLNRSQTGKDGHLHRHFVDPVLNQLQRPPQETGERLNKYKEEH
RRILQESIDVAPFTTKIKGLECDRDNYSRVASSSSSPKSHVIKQDKDIETDLYKMKHSVP
HSLPQSNYFTTLSNSVVNEPPRSYPSKEISNIYTEKQSNTLATAANPQTLTSFISSLSKP
PPLIKHQPESEGLVGKVPEHLSHQFASHSVTTFRNDCRSPTHLTVSSTNTLRSMPALHRA
PVFHPPIHHSLERKESSYSSLSPPTLTPVMPVNAGGKVQESQKPPTLIPEPKDTQASFKS
SSEQSLTEMWKSNNNLSKEKAEWRVEKSSGKSQAAMASVIVRPPSSTKLDSVPAVQLASK
ERVSERSSLGANQTDCLKPAEAGESGRVILPSVNSDSAHIKSEKNFQAVSQGSVPSSVTS
AVSTVCNTKTDTFTSAATAPGVSSWGGSEIIYSLSNTILASKSLECTSSKSVSHSVAQTQ
ECTVSITAPVTPASSKTGSAVQPSSGFSGTTDFIHLKKHKAALAAAQYKSSNVSETEPNA
AKSQTSSASHLLDSTVVCSTINKADSVGNGQASQTSQPNYHTKLKKAWLTRHSEEDKNTN
KMENSGSSVSEIIKPCSVNLIASTSNDLQNSVDSKIIVDKYVKDDKVNRRKAKRTYESGS
ESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEMEEDLKPNGILSRSAKEKSKLKL
QSNNNTGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRECRLIRSKKGEEPT
HSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAMSLWTHENYEDDELDIETSKYIL
DIIGDKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGFV
VCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHTLREK
YGIKSHCHCTNKQNIQVGNFSPMNGVSQVLQNVLNHSNKISLCMPESQQQSTPQKPESNG
SSSPGSDVSTDSKLTPPESQSPLHWLADLAEQKAREEKKENKEFALEKQIKEEREQDDPD
SPNSRTSPPVSQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSMGTPSGKSGRTMP
NILDDIIASVVENKIPPNKASKINVKSEFKEEPKESRKSAMDENSKLYSDIPHSWICEKH
ILWLKDYKNTNNWKLFKECWKYGQPAVVSGVHKKMNISLWKADSISLDFGDHQADLLNCK
DSIISNANVKEFWDGFEEVSKRQKTKSGETVVLKLKDCPSGEDFKTMMPARYEDLLKSLP
LPEYCNPEGKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHVEVSDVVNIL
VYVGIAKGNGILSKAGILKKFEEEDLDDILRKRLKDSSEIPGALWHIYAGKDVDKIREFL
QKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVKTCTLVQFLGDAIVLPAGALH
QVQNFHSCIQVTEDFVSPEHLVQSFHLTQELRLLKEEINYDDKLQVKNILYHAVKEMVRA
LKIHEDEVEAMEEN
NT seq 7605 nt   +upstreamnt  +downstreamnt
atggcggtggagacgcggccggagctggtggggaagcggttcctttgcctggcgctcggc
gaagaggcgcggctggagcgcggggagagcggacgctgctggcggggctggcgagcgggg
gttatccgagcggtgtcacacagggacagccgcaatcccgacctggcggtgtatgtggaa
tttgatgatcttgagtgggataaacgagagtgggttaaagtttatgaagatttttcaacc
ttcttggtggaataccacttaatctgggccagaaggatcaaccctagccagactcaggga
tcaaagagcaaacagattcagtggcctgcattgactttcaaacccctggttgaaaaaagt
gtacccagttcaatcactgcagtagaattccttgtagataaacaactggattttttaact
gaagatagtgcctttcagccctaccaggacgacatagacagcctaaacccagttctcagg
gacaacccgcaacttcaggaagaagtgaaagtctgggtaaaggaacaaaaggttcaggag
atttttatgcaaggtccttactccttgaatggatacagagtgagagtatatagacaagac
tctgccacccagtggttcactggcataattactcatcatgatctcttcactcgcaccatg
atcgttatgaatgatcaggtactagaaccacagaatgtcgatccttctatggttcaaatg
acctttctagatgatgttgttcactctttgttaaaaggtgaaaatattggcattacatca
cggcgaaggtctcgtgccagtcaaaatagcaacactgttcacggtcattatacacgtgcc
caagcaaatagtcccagaccagcaatgaactcccaaactgctgtaccaaaacagaattca
caccagcaacaaagaaatattcgtccaaataagaggaagggctcagatagcagtatacca
gatgaagagaagatgaaggaggaaaaatatgattatatagcacgaggagaaaatcctaaa
ggtaaaaaacaggtgatgaacaaaagaaggaaagctgaggaggatgaaaagaaactaaat
atgaaaagactgcgaaccgacaatgtttcagacttttctgagagtagtgactcagaaaat
tcaaataagagaataataaataattcctcagagcagaagccagagaatgagttgaaaaat
aaaaacacttcaaagataaacggagaagaaggaaaatctcagaataatgagaaggcagaa
gagacactaatagatagccagcatccctgggatcaaatacaggaagataaaaaacatgaa
gaaacagagaaacagaaatctgttgactttcagcgtcaagaaaaaatgattatccattca
tcagaacaggccacactttctgatcataattctagtgatttacttcttcaggaacgtaat
acagagaagacacacacaatggaattattaccaaaggagaagtttgtatccagaccgccc
actccgaaatgtgttattgatattacaaatgacactaacacagaaaaggtggctcaggaa
acctcaagtagtacctttggccttcaaacacttcagaaaatggatcctaatgttagtgat
tcaaaacattcaattgcaaatacaaaatacttggaaacaggaaaccaagattctgaccag
aactgggtcagtgatgtagttaaagtagatttaacccaatcaaatgtaaggaatgcttct
tcaggaaatgaaaacttgagtatggaaaaagagaaaaatcagtatgtctcttacttatct
tctctaagtgctgtttctgtcacagaagataagctgcataagcgaagtccacctccagaa
actataaaatctaaacttaatacttcagtagatgctcccaagacaaaatccaatccctcg
cctgaagttgttaagcctaaagtcaaccattcccctgattctgtaaagtctaaagccact
tatgcgaacagccaagctgctggtgaaagaagaccagcaaataagatagaacatgagtta
tcaagatgcagttttcacccggttcctactagaggcagtacattagaaactacaaaaagc
cctctaatcattgataaaaatgaacattttacagtttacagagatcctgcacttattggg
tcagatacaggagctaaccacatttcacctttcttaagccagcatccttttcctcttcat
tcttcatcccatagaacatgtttaaatccaggtacccatcatcctgccttaactcctgca
ccccacttactggctggatcatccagtcaaactccattacctaccattaacactcaccct
ctgactagtggtccacaccattctgttcatcaccctcatttacttcctactgtgttaccc
ggagtgcctactgcctccttacttggtggccacccacgactagagactgctcatgccagc
agcttgagccacttagcattagcacaccagcaacagcaacagttgttacagcaccagtca
cctcatctccttggacaagcccatccatctgcttcatataatcagcttggactttatcca
attatttggcaatatccaaatggaacacatgcatactcaggacttggtctgccttctaag
tgggttcacccagaaaatgcggttaatgctgaaccttcattaaggaggaattctcccagt
ccttggttacatcagcctacccctgtgacctcagcagatggtattggattacttagtcac
attcctgtcagaccttccagtgcagaacctcatcggcctcttaaaatcgcagcacattcc
agtccgccactgacaaaatgtttagtagatcaccataaagaagaattggagaggaaagct
ttcattgaaccactgcgttctgttgcatccacatcagccaaaaatgacctggatctaaac
aggtcacagactggaaaagatggtcacttgcataggcattttgtggatcctgtattgaat
caattacagagaccaccccaggaaactggagagagattaaacaaatataaggaggaacac
cgtcgaattcttcaagaaagtattgatgttgctccctttacgactaaaatcaagggtctt
gagtgtgatagagataattattccagagtagcatcgtcatcttctagccctaagagccat
gtcatcaaacaagacaaggatatagaaacagatctttataaaatgaagcactcagtgcct
cacagtttgcctcaaagtaactatttcactacattgtctaatagtgtagtcaatgaacca
ccaaggtcatacccatccaaagagatttcaaatatttacactgaaaaacagagtaatacc
cttgcaacagcagctaatcctcaaactctgacttcatttatatcatctctttcaaagcct
ccacctttgataaaacatcagccagaaagtgaaggtttagtaggcaaggtaccagaacat
ctttcccatcaatttgcttctcactcagtaacaactttcagaaatgactgtaggagtcct
actcatttgacagtttcttctacaaatacactccggagtatgcctgctttacatagagca
ccagtatttcacccgccgatccatcatagcctggaaagaaaggaaagcagctatagtagc
ctttcccctccaacgttaactccagtgatgcctgtaaatgctggtgggaaagttcaggaa
tcacaaaagcctcccacactgattcctgagccaaaagatactcaggcaagttttaagagt
tcttctgaacagagtttgacagaaatgtggaaatctaataataacctcagcaaagagaaa
gctgaatggcgtgtagagaaaagcagcggaaagtcccaggctgccatggcgtctgtcatc
gtgcgtccaccttcaagtacgaaactcgacagcgtgccagcagtacagttagcttccaaa
gagcgagttagtgaaagatcttcacttggggcaaatcaaacagattgcctcaaaccagca
gaagctggagagagtggaagagtcattctgccaagtgtgaattcagacagtgctcacata
aaatccgaaaaaaactttcaggctgtctcacagggcagtgttcccagttcagtcacgtct
gctgtaagtacagtgtgtaataccaaaacggatacattcacatctgctgccactgccccc
ggtgtttccagctggggtggttcagaaataatttactcattatcaaataccattttggcc
tctaaatccttagaatgtacctcttcaaaaagcgtcagtcattcagtggctcaaacacaa
gaatgcacggtcagcatcacagctccagttacaccagccagcagtaagacaggaagtgct
gttcagcccagctctgggttttcaggcacaactgattttattcatttaaagaagcacaag
gcagcgttggccgcagctcaatataaaagtagtaatgtcagtgagactgagcctaatgct
gcgaaaagtcagacgtcttcagcctcccatctcttagatagcactgtagtctgtagtaca
ataaacaaagcagactctgtaggaaatgggcaagcatcccagacaagtcaaccaaactac
catactaaactgaaaaaagcctggcttacgagacattcagaagaagataaaaatactaat
aaaatggaaaattcagggagttctgtatcagaaattattaagccatgttctgtcaattta
atagcctctacatctaatgatctacaaaatagtgtagatagtaagatcatagttgataaa
tatgtaaaagatgataaagtaaatagaagaaaagccaaacgaacttatgaatctggctcc
gaaagtggagattcggacgaaagtgaaagcaaatcagagcaaaggactaaaaggcaacct
aagccaacttacaaaaagaagcaaaatgatcttcaaaagagaaaaggtgaaatggaagaa
gatttaaaacccaatgggattctcagcaggagtgccaaagaaaaaagtaaattgaagttg
cagagcaacaataatactggcatccctcgttcagtgttgaaagattggcgtaaagtcaag
aagctgaagcaaactggggaatcctttttacaggatgactcctgctgtgagatagggcct
aatttgcaaaagtgccgagaatgtagacttattcggagtaaaaagggagaagaaccaact
cactcaccagtgttttgtagattttactactttagacgattgtcatttagtaaaaatgga
gtggttagaatagatggtttctcttctcctgaccagtatgatgatgaagctatgagttta
tggacacatgaaaattatgaagatgatgaactagacatagaaacatcaaaatacatcttg
gacataataggtgataagttctgtcagttggtaacatctgaaaaaacagctttgtcctgg
gtgaaaaaggatgccaaaattgcctggaaaagagcagtgaggggagtccgggagatgtgt
gatgcatgtgaagcaacattgttcaacattcactgggtctgccaaaaatgtggatttgtg
gtctgcttagattgttacaaggcaaaggaaaggaagagttctagagataaagaattgtat
gcttggatgaagtgtgtgaagggacagcctcatgatcacaaacatttgatgccaactcaa
attattcctggttctgttttgacagatcttttggatgcgatgcacactcttagagaaaaa
tatggtattaaatcccattgtcattgtactaacaaacagaatatacaagttggaaatttt
tctcctatgaatggtgtgtctcaagttttacagaatgttcttaatcacagtaataaaatt
tctctgtgcatgcctgagtctcagcagcaaagtacccctcagaagcctgaaagtaatggc
agcagcagtccagggagtgatgtgagcacagacagcaagttaactcctccagaatcccag
tcacccctgcactggttagcagatcttgcagagcaaaaggccagagaggaaaaaaaagaa
aacaaagaatttgcccttgaaaagcaaataaaagaagagagagaacaagatgatcctgat
tctccaaatagtagaacatcacctcctgtatcccagaataatgagcaaggttcaacatta
cgagatttgctgaccacaaccgctggcaagctacgcgtggggtctacagatgctggcatt
gcctttgcaccagtttattcaatgggaacccccagtggtaaaagtggaaggactatgcca
aacattcttgatgacataattgcttcagttgttgaaaacaaaattccaccaaataaagcc
tctaagataaatgtaaaatcagagttcaaagaagaacccaaagaaagcagaaaatctgcc
atggatgaaaacagtaaattgtacagtgatataccacattcttggatctgtgagaagcat
attctgtggcttaaggattataaaaatactaataattggaagcttttcaaagagtgttgg
aaatatggacaacctgcagtggtttctggcgtgcataagaaaatgaacattagcttgtgg
aaggcggactcaattagtcttgattttggagaccaccaagctgatctcctcaactgcaaa
gacagcattatttcaaatgccaatgttaaggaattctgggatggttttgaggaagtttca
aaacggcaaaaaacaaaaagtggagaaacagttgttttaaaattgaaagactgcccttca
ggagaagacttcaagactatgatgccagcaagatatgaagatcttttaaaaagcctgccg
ttgccagaatattgtaatccagaaggaaagttcaacctggcctctcacttaccgggattt
tttgtgcgccctgatctaggacccaggttgtgcagcgcttatggtgtagctgctgctaaa
gatcatgatataggaacaacaaatctacatgttgaagtttctgatgttgtaaatattcta
gtctatgttggcatagcaaaaggaaatggcattctctcaaaagcaggaatactcaagaaa
tttgaggaagaagatttggatgacattttaagaaaacgattgaaggactcaagtgaaata
cccggtgctctgtggcatatttatgctgggaaagatgttgacaagatacgggaatttctt
cagaagatttcaaaagaacaaggccttgaagttctaccagaacatgatccaatacgtgac
cagagttggtatgtgaacaaaaagcttcgtcaaagactgcttgaggaatatggagtcaaa
acctgcactctggttcagttcctcggtgatgccattgtcttaccagcaggagcacttcat
caggtacagaattttcacagctgtattcaggtaaccgaagactttgtgtctccagaacat
ctcgtacagtcatttcatttaacacaggaactgagacttttgaaggaagaaatcaattat
gatgataaactacaggttaaaaatatcttgtatcatgcagtcaaggaaatggtgagagct
ttgaagatacatgaagatgaagtagaggctatggaagaaaattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (55)   
   KEGG ORTHOLOGY (1)   
   RefGene (48)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (4)   
   Pfam (4)   
All databases (76)   

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