KEGG   Burkholderia thailandensis USAMRU Malaysia #20: BTRA_5322
Entry
BTRA_5322         CDS       T03391                                 
Symbol
clpV
Name
(GenBank) type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
bthm  Burkholderia thailandensis USAMRU Malaysia #20
Pathway
bthm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bthm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BTRA_5322 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bthm02044]
    BTRA_5322 (clpV)
Secretion system [BR:bthm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BTRA_5322 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_22 nSTAND3 AAA_7 Sigma54_activat RuvB_N Zeta_toxin TniB AAA_25 AAA_24 ResIII AAA_18 AAA_33 NACHT AAA_14 Hpr_kinase_C Rad17 T2SSE
Other DBs
NCBI-ProteinID: AIC91152
Position
2:2355946..2358603
AA seq 885 aa
MSDIGRVTLFGKLNAFLYETLEQATGFCRLRGNPYVELAHWLNQMLQRPDSDVHRVLRRF
DIEAAAIDRGIVSALDRLPRGAGSVSDLSAHIDDAVERAWVYATLKYDATQIRGAVLLLA
IVKTAQLRNVLYAIARDFERIVPDVFADELERIVEGSPEAPPPAARASAGAGGGASPAAR
EGSALARYAVDLTARARAGEIDPVVGRDGEIRQIVDILLRRRQNNPLLVGEAGVGKTAVA
EGFALRIVAGDVPPPLRDVELYLLDIGLLQAGASVKGEFESRLRGVIDEATSSERPVILF
VDEVHTLVGAGGAAGTGDAANLLKPALARGLLRTIGATTWSEYKQYIEKDPALTRRFQLV
QVREPEEGAALTMLRGLAAKLEAHHRVLVLDDALQAAVTLSHRYIPARQLPDKAISLLDT
ACARVAVSQHAVPAPIEDARRRIDSLRVERELIARECALGAGDAPRLDAIDASIASEQAA
LDALDARWQAERDALGQIVDWRASLLADDPSRALDETARADVQAKLSAALRALAELQGET
PLVLPAVDTHAVAAVVSDWTGIPLGRMVRDEMQSVLKLADTLAERVVGQRHAVELIAERI
QTARARLDDPAKPHGVFLLCGPSGVGKTETALALAETLYGGEHNAITINMSEFQEAHTVS
TLKGAPPGYVGYGQGGVLTEAVRRRPYSVVLLDEIEKAHRDVHEIFFQVFDKGWMEDGEG
RYIDFRNTVILLTSNVGSERVMQLCRDPQRLPDAQTLTDALRAPLREVFPAALLGRLSVV
PYYPLTDEMLARIVALQLARIERRIESHHGIALRCEDSATALIVERCRTIESGGRMVDAI
LTHTVLPRISQEILRATIEGRALRAIDVSAEDGQFVYRFEEEGAT
NT seq 2658 nt   +upstreamnt  +downstreamnt
atgtccgatatcggccgagtgaccttgttcggaaagctgaacgcttttctctacgagaca
ttggagcaggcgacgggcttctgccggctgcgcggcaatccgtacgtcgagctcgcgcac
tggctgaaccagatgctccagcgcccggacagcgacgtgcaccgggtcctgcgccgcttc
gacatcgaagcggccgcgatcgatcgcgggatcgtctcggcgctcgaccggttgccgcgc
ggcgcgggctccgtgtccgatctgtccgcgcacatcgacgacgcggtcgagcgcgcgtgg
gtctacgcgacgctcaaatacgacgcgacgcagatccgcggcgcggtgctgctgctcgcg
atcgtgaagacggcgcaactgcgcaacgtgctgtatgcgatcgcgcgcgacttcgagcgg
atcgtgccggacgtgttcgccgacgaactcgagcggatcgtcgaaggctcgccggaagcg
ccgccgccggcggcgcgcgcatcggcgggcgcggggggcggcgcatcgcccgccgcgcgg
gaaggctcggcgctcgcgcgctacgcggtcgatctgaccgcgcgggcgcgcgcgggtgag
atcgatccggtggtgggccgcgacggcgagattcgtcagatcgtcgacatcctgctgcgc
cgccggcagaacaatccgctgctcgtcggcgaggcgggcgtcggcaagaccgcggtcgca
gaaggcttcgcgctgcgcatcgtcgcgggcgacgtgccgccgccgctgcgcgacgtcgaa
ctgtatctgctcgacatcggcctgctgcaagcgggcgcgagcgtgaagggcgaattcgag
agccgcctgcgcggcgtgatcgacgaggcgacatcgagcgagcggcccgtcattctgttc
gtcgacgaggtgcatacgctcgtcggcgcgggcggcgcggcgggcacgggcgacgcggcg
aacctcttgaagcccgcgctcgcgcgcggcctgctgcgcacgatcggcgcgacgacgtgg
tccgagtacaagcagtacatcgagaaggacccggcgctcacgcggcgcttccagctcgtg
caggtgcgcgagccggaggagggcgcggcgctgacgatgctgcgcggactcgccgcgaag
ctggaggcgcaccaccgcgtgctcgtgctcgacgatgcgttgcaggcggccgtcacgctg
tcgcatcgctacattccggcgcggcaattgcccgacaaggcgatcagcctgctcgacacc
gcgtgcgcgcgcgtcgcggtcagccagcacgcggtgcccgcgccgatcgaggatgcgcgg
cggcggatcgacagcctgcgcgtcgagcgcgaactgatcgcgcgcgagtgcgcgctcggc
gcgggcgatgcgccgcggctcgatgcgatcgatgcgtcgatcgcgagcgaacaggccgcg
ctcgatgcgctcgacgcgcgctggcaggcggagcgcgacgcgctcggccagatcgtcgac
tggcgggcctcgctgctggccgacgatccttcgcgcgcgctcgatgagacggcgcgcgcg
gacgtgcaggcgaagctctcggctgcgctgcgcgcgctcgccgagttgcagggcgagacg
ccgctcgtgctgcccgcggtcgacacgcacgcggtggccgccgtcgtgtccgactggacc
ggcatcccgctcggccggatggtgcgtgacgagatgcaatcggtgctgaagctcgccgac
acgctcgccgagcgtgtggtcggccagcggcacgcggtcgagctgatcgccgagcgcatc
cagaccgcgcgcgcgcggctcgacgatccggccaagccgcacggcgtgttcctgctgtgc
gggccgtccggcgtcggcaagaccgagacggcgctcgcgctcgccgagacgctgtacggc
ggcgagcacaacgcgatcacgatcaacatgagcgagttccaggaggcgcataccgtatcg
acgctcaagggcgcgccgcccggctacgtcggctacggacagggcggcgtgctgaccgag
gcggtgcggcggcggccgtacagcgtcgtgctgctcgacgaaatcgagaaggcgcaccgc
gacgtgcacgagatcttctttcaggtgttcgacaagggctggatggaagacggcgaaggg
cgctacatcgactttcgcaacacggtgatcctcctcacgtcgaacgtcggttccgagcgc
gtgatgcagctgtgccgcgacccgcagcgcctgcccgatgcgcagaccttgaccgatgcg
ctgcgcgcgccgctgcgcgaagtgttccccgccgcgttgttgggacgcctgagcgtcgtg
ccgtactacccgctcaccgacgagatgctcgcgcggatcgtcgcgttgcagctcgcgcgc
atcgagcgccgaatcgaatcgcaccacggcatcgcgctgcgctgcgaggattcggcgacc
gcgctgatcgtcgagcgctgccggacgatcgaatccggcggccggatggtcgacgcgatt
ctcacgcacacggtgctgccgcgcatcagccaggagatcctgcgcgcgacgatcgagggg
cgcgcgctgcgggcgatcgacgtgagcgccgaagacggccagttcgtttatcgattcgaa
gaggagggtgcgacgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (23)   
   Pfam (23)   
All databases (30)   

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