KEGG   Bacillus thuringiensis serovar kurstaki YBT-1520: YBT1520_32176
Entry
YBT1520_32176     CDS       T03435                                 
Name
(GenBank) DNA topoisomerase 1
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
bthr  Bacillus thuringiensis serovar kurstaki YBT-1520
Brite
KEGG Orthology (KO) [BR:bthr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bthr03032]
    YBT1520_32176
   03400 DNA repair and recombination proteins [BR:bthr03400]
    YBT1520_32176
Enzymes [BR:bthr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     YBT1520_32176
DNA replication proteins [BR:bthr03032]
 Prokaryotic type
  DNA Topoisomerases
   YBT1520_32176
DNA repair and recombination proteins [BR:bthr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      YBT1520_32176
SSDB
Motif
Pfam: Topoisom_bac Toprim_Crpt Toprim zf-C4_Topoisom CtsR_C Mnd1 RPA_interact_C PADR1_Zn_ribbon
Other DBs
NCBI-ProteinID: AHZ54933
Position
pBMB293:165396..168059
AA seq 887 aa
MGKTLFIAEKPKVANEIMKSPRFRHSQKYIGSKPYYGYYENDHYIVSWCRGHLLELKNPE
EMDPKYKVFQLEHLPLIFQPSYKVIQENAEQLQILVKLLQRPDVDHAVNICDADREGELI
YREVYEYAGVNKKQSRVYKSSFEAVELEAALNRLESASKYDGLAYSAKARQYLDYLLGMN
ITRGCTTKLAQNKFLLASGRVQMCLLHEIRQRELAIENYKEQSYYHLQLVTNLGLTPVMK
TEDQVLNPSPLRSLGEKLKGQYLTVEEFKEGTRKQNPKLLYNLTDLYKDAHAQLQINAET
AKKYIQNLYEEGFITYPRSSSRHLPTEQVERVKGVMQALAKSRYSLLVQSVDIDAIDIKH
KTFDDDLVSSHFAIIPTTKQYQEEGRPEIEQQLYSLVVKRFVGNFMRPAVYLVRDVSLID
AMGNTYQIKESVLREKGFLEVFQEEVEEESVETFKVPILQKGQELQIYDFELLESKTKKP
ALHTESSILAFMETAGRKIDDEHLKELMKGKRIGTVATEAAFIPALHEKNFIDIEKGKII
TTPIGRAFIEQFPVQQIKDPLYTAEMEGMIHRIEKNEMSYKDFIVQTNAFVQKITQEIIR
IPDTVSYNLIETWKQQIEVCQCPCGNGIILDRGKFFGCSNHPNCNIGLPKKIKDKTIPTV
QVKKLFEENKTDVIKGFKSNGKEFSAYLAFINGEVSFNLPTVEELSLGQCPKCQKGHILN
RDKFFGCSEYQNGCNFAISAKIKEKKLSDSQIKKLLKNRVTDFIHGFKGEYGEFTAAIRL
KEDLSICFERPTTDDRTIGKCPLCQGRVIVGKTTYLCEHYKNPCEFIVSGSILKKKITSA
QVKKLLEKNMTDTISGFESKKTGEKFDAKLTYDVQKQRITFIMNKKK
NT seq 2664 nt   +upstreamnt  +downstreamnt
atgggaaaaacgttatttattgcggaaaagccgaaagtggccaatgaaattatgaaatcg
ccacgtttccgacactcacaaaagtacattggaagcaaaccttattacggttattacgaa
aatgatcattatattgtcagttggtgccgtggacatttactggaactgaaaaatccggaa
gagatggatccaaagtataaagtgtttcagttagaacatttacccttaatttttcaacca
tcgtataaggtgatacaagaaaatgcagagcaactacaaatccttgttaaactgttacag
cgacctgatgttgaccatgccgtgaacatatgtgacgcggaccgcgagggagagttaatc
tatagggaagtgtacgaatacgcaggtgtgaataaaaagcaatctcgcgtatataaatcc
tcttttgaagctgtagaactcgaagcagctctcaatcgattagaaagcgcgtctaagtat
gatggactagcttattctgctaaagcaaggcagtatttagattatctattagggatgaat
ataaccaggggatgcaccacaaaattagcgcaaaataaattcctattggcatctggccgt
gtacaaatgtgtttgctacatgagatccgtcaacgtgagttagcaattgaaaactataag
gaacagtcttattatcatctgcagctagtaacaaatttaggactcactccagttatgaaa
acagaagatcaggtgttaaacccatcgccattaaggagtttaggggagaagctaaaaggt
caatatctcacggttgaggaatttaaagagggcactaggaagcaaaatcctaaattgcta
tacaacttaacagacttgtacaaagatgcccatgcacaattacaaattaatgctgaaact
gcaaaaaaatacattcagaacttgtatgaagaaggttttataacctatccacgctcttcg
tctaggcatttacctacagaacaagtggaacgagtaaaaggtgttatgcaggcgctagct
aagagtcgttattctttactggtacaatccgtcgatattgacgccattgatataaaacac
aaaacatttgatgatgatcttgtatcaagccattttgccattataccgacgactaaacaa
tatcaagaggaaggtcgtccagagattgaacaacaactatacagtctcgtggtaaaacgt
tttgtgggcaatttcatgcgtcctgcagtgtacctggtaagagatgtatcccttattgat
gcaatgggaaatacctatcaaataaaagaaagtgtgcttcgagaaaaaggtttcctagaa
gtgttccaagaggaagtagaggaagaaagtgtggaaacatttaaagttcctatcctgcag
aaaggacaagaacttcaaatctatgattttgagttgctggaatccaaaacaaagaaacct
gctctacacacagaaagctcaattcttgcttttatggaaacggctggtcgtaaaattgat
gatgaacatttaaaagagctgatgaaaggaaaacgaattggaaccgtagcaacagaagcg
gcttttattccggctttacacgagaagaattttatagacattgaaaagggaaaaattatt
acaactccaattggccgtgcctttattgaacaatttcctgttcagcaaattaaagatcca
ctgtacacagcagaaatggaaggaatgatacaccgtattgaaaagaatgaaatgagttat
aaagacttcattgtacaaacaaatgcgtttgtacaaaaaataacacaagagattataaga
attcctgatacagtttcgtataatctaatagaaacctggaagcaacaaatagaagtatgc
caatgcccttgtggaaatggaataattttagatagaggaaagtttttcgggtgcagcaat
catccgaactgtaacattggcttgcctaagaaaattaaagacaaaacaattcctacagtg
caagtaaaaaaactgtttgaagagaacaaaacggacgttataaaaggatttaaatctaat
ggcaaagagttttctgcttatctagcatttataaatggtgaagtaagctttaatttgcct
acagttgaagaattatcgctaggtcagtgtccaaagtgtcaaaagggacacattttaaac
cgtgataagttttttgggtgttcagaatatcaaaacggatgtaattttgcgatatcagct
aaaattaaagaaaagaaattatctgatagccagattaagaaattattgaagaatcgcgtt
actgacttcattcatggttttaaaggagagtacggagaattcactgcagctatccgatta
aaagaagatcttagcatttgttttgaacgtccaacaacggatgatcgtactatagggaaa
tgtcctttgtgccaaggaagggtaattgtaggaaaaactacttatttatgtgaacattac
aaaaatccttgcgaattcattgtgtctggaagcattttgaaaaagaaaataactagcgca
caagtaaaaaagttattagagaagaatatgaccgatacaatctcaggatttgaaagtaag
aaaaccggagaaaaattcgatgcaaaattaacctatgatgtacaaaaacaacgtattaca
tttataatgaataaaaagaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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