KEGG   Bacillus thuringiensis YBT-1518: YBT1518_03870
Entry
YBT1518_03870     CDS       T02930                                 
Name
(GenBank) HfQ protein (RNA-binding protein)
  KO
K03666  host factor-I protein
Organism
bthu  Bacillus thuringiensis YBT-1518
Pathway
bthu02024  Quorum sensing
bthu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bthu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    YBT1518_03870
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    YBT1518_03870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bthu03019]
    YBT1518_03870
   03036 Chromosome and associated proteins [BR:bthu03036]
    YBT1518_03870
Messenger RNA biogenesis [BR:bthu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     YBT1518_03870
Chromosome and associated proteins [BR:bthu03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    YBT1518_03870
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: AHA69993
UniProt: A0A9W3K973
Position
830565..830753
AA seq 62 aa
MEVKLQAFQKDKSKNMLSLQEQLLQEAFQMRKDITLILLKGLHVKGIIRGFDTYSVLIEV
EG
NT seq 189 nt   +upstreamnt  +downstreamnt
ttggaagtgaaattacaagcattccaaaaggataaaagcaagaacatgctatctttgcag
gaacaattgttgcaagaggcgtttcaaatgaggaaggatatcactttaattctgttaaaa
ggattgcatgtaaaaggaataataagaggatttgatacgtattctgttttaatagaagtt
gaaggatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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