KEGG   Bacillus thuringiensis Al Hakam: BALH_4830
Entry
BALH_4830         CDS       T00429                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
btl  Bacillus thuringiensis Al Hakam
Pathway
btl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:btl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BALH_4830 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:btl03021]
    BALH_4830 (rho)
   03019 Messenger RNA biogenesis [BR:btl03019]
    BALH_4830 (rho)
Transcription machinery [BR:btl03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BALH_4830 (rho)
Messenger RNA biogenesis [BR:btl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BALH_4830 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_25 ATPase_2 AAA Spore_III_AA NACHT AAA_22
Other DBs
NCBI-ProteinID: ABK88010
UniProt: A0RLB7
Position
complement(5087799..5089070)
AA seq 423 aa
MNLSIAALENMKLKELYELAKEFKISYYSKLTKKELIFAILKARAEKEGFFFMEGVLEII
QSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYFGLLQVEAV
NGDDPESAKERVHFPALTPLYPDRQMKLETEPKKLPTRIMDLIAPVGFGQRGLIVAPPKA
GKTSLLKEIAHSVTTNHPEAELIVLLIDERPEEVTDIERSVKGDVVSSTFDEVPENHIKV
AELVLERAMRLVEHKKDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFG
AARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIRR
SGTRKEDLLIPKEHLDKLWGIRKTMRDTPDFVESFLRKLRQTKTNEEFLQNIVADSKRYV
TTK
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgaatttgtcaattgcagcattagaaaacatgaaattaaaagagttatacgagcttgcg
aaagaatttaagatttcgtattatagcaaattaacgaaaaaagagttaatcttcgccatt
ttaaaagctcgagcagaaaaagaaggtttcttcttcatggaaggcgtattagaaattatt
caatcagaaggatttggattcctacgtcctatcaactactctccaagctcagaagatatt
tatatctcagcttcgcaaattcgtcgtttcgatttacgtaatggagataaagtttctggt
aaagtacgacctccgaaagaaaatgaacgctactttggattattacaagttgaagctgta
aacggagatgatccagagtcagcaaaagagcgtgtgcatttccctgcattaacaccatta
tacccagatcgccaaatgaaattggaaacggaaccgaaaaagttaccgacacgcatcatg
gatttaattgcaccagttggatttggacaacgtggtttaattgtcgcgcctccaaaggct
ggtaaaacaagtctattaaaagaaatcgcgcacagtgttacaacaaatcatccggaagct
gaattaattgtacttttaattgatgagcgtccagaggaagtaacagacattgaacgttct
gttaaaggagatgttgtaagctctacttttgatgaagtaccagaaaatcatattaaagta
gcggaacttgtgttagaacgtgcaatgcgtcttgtagagcacaaaaaagatgttatcatt
ttaatggatagtattacccgtttagcgcgagcttacaaccttgttattccgccaagtggt
agaacattatcgggtggtatcgacccagctgccttccatagaccgaagcgcttctttgga
gctgcacgtaatattgaagaaggcggtagcttaactattttagcaacagcgcttgttgat
acaggatctcgtatggacgatgtaatttacgaagaatttaaaggaactggaaatatggaa
cttcacttagatcgttcattagctgagcgtcgtatcttcccggcaattgatattcgccgt
tctggtacacgtaaagaggatctattaattccgaaagaacatttagacaagctgtggggt
attcgtaaaacaatgcgtgatacaccagactttgttgaaagtttcttacgtaaacttcgt
caaacaaagacaaatgaagaatttttacaaaacattgttgcagattcaaaaagatatgta
acaactaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system