KEGG   Bacillus thuringiensis HD1011: BF38_1059
Entry
BF38_1059         CDS       T03675                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
btw  Bacillus thuringiensis HD1011
Pathway
btw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:btw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BF38_1059 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:btw03021]
    BF38_1059 (rho)
   03019 Messenger RNA biogenesis [BR:btw03019]
    BF38_1059 (rho)
Transcription machinery [BR:btw03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BF38_1059 (rho)
Messenger RNA biogenesis [BR:btw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BF38_1059 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_25 ATPase_2 AAA Spore_III_AA NACHT AAA_22
Other DBs
NCBI-ProteinID: AJG77482
Position
complement(1004074..1005345)
AA seq 423 aa
MNLSIAALENMKLKELYELAKEFKISYYSKLTKKELIFAILKARAEKEGFFFMEGVLEII
QSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYFGLLQVEAV
NGDDPESAKERVHFPALTPLYPDRQMKLETEPKKLPTRIMDLIAPVGFGQRGLIVAPPKA
GKTSLLKEIAHSVTTNHPEAELIVLLIDERPEEVTDIERSVKGDVVSSTFDEVPENHIKV
AELVLERAMRLVEHKKDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFG
AARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIRR
SGTRKEDLLIPKEHLDKLWGIRKTMRDTPDFVESFLRKLRQTKTNEEFLQNIVADSKRYV
TTK
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgaatttgtcaattgcagcattagaaaacatgaaattaaaagagttatacgagcttgcg
aaagaatttaagatttcgtattatagcaaattaacgaaaaaagagttaatcttcgccatt
ttaaaagctcgagcagaaaaagaaggtttcttcttcatggaaggcgtattagaaattatt
caatcagaaggatttggattcctacgtcctatcaactactctccaagctcagaagatatt
tatatctcagcttcgcaaattcgtcgtttcgatttacgtaatggagataaagtttctggt
aaagtacgacctccgaaagaaaatgaacgctactttggattattacaagttgaagctgta
aacggagatgatccagagtcagcaaaagagcgtgtgcatttccctgcattaacaccatta
tacccagatcgccaaatgaaattggaaacggaaccgaaaaagttaccgacacgcatcatg
gatttaattgcaccagttggatttggacaacgtggtttaattgtcgcgcctccaaaggct
ggtaaaacaagtctattaaaagaaatcgcgcacagtgttacaacaaatcatccggaagct
gaattaattgtacttttaattgatgagcgtccagaggaagtaacagacattgaacgttct
gttaaaggagatgttgtaagctctacttttgatgaagtaccagaaaatcatattaaagta
gcggaacttgtgttagaacgtgcaatgcgtcttgtagagcacaaaaaagatgttatcatt
ttaatggatagtattacccgtttagcgcgagcttacaaccttgttattccgccaagtggt
agaacattatcgggtggtatcgacccagctgccttccatagaccgaagcgcttctttgga
gctgcacgtaatattgaagaaggcggtagcttaactattttagcaacagcgcttgttgat
acaggatctcgtatggacgatgtaatttacgaagaatttaaaggaactggaaatatggaa
cttcacttagatcgttcattagctgagcgtcgtatcttcccggcaattgatattcgccgt
tctggtacacgtaaagaggatctattaattccgaaagaacatttagacaagctgtggggt
attcgtaaaacaatgcgtgatacaccagactttgttgaaagtttcttacgtaaacttcgt
caaacaaagacaaatgaagaatttttacaaaacattgttgcagattcgaaaagatatgta
acaactaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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