KEGG   Bacillus thuringiensis HD1011: BF38_4967
Entry
BF38_4967         CDS       T03675                                 
Symbol
rnjB
Name
(GenBank) ribonuclease J 2
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
btw  Bacillus thuringiensis HD1011
Pathway
btw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:btw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BF38_4967 (rnjB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:btw03019]
    BF38_4967 (rnjB)
Messenger RNA biogenesis [BR:btw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BF38_4967 (rnjB)
SSDB
Motif
Pfam: RNase_J_C RMMBL Lactamase_B Lactamase_B_2 PDEase_II
Other DBs
NCBI-ProteinID: AJG74772
Position
complement(4824133..4825803)
AA seq 556 aa
MKRKENESVKVFALGGVGEIGKNMYCVEIDSEIFIVDAGLMFPGDEMFGIDIVIPDITYL
VENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGRVDLK
TIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAIVYTGDFKFDQTPIGNSGADLG
KMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNVHRIQ
QVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAILTTG
SQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEVVYYG
ERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGIARENIFIVEKG
DVIGFGDDEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLGKDEKK
IISGPEIISRGFVYVRESEALIDRSTEIVRMIVEQSIKEYSIEWSMLKQNIRELLGQFLY
EETKRKPMILPIIMEV
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgaagagaaaagagaatgagtctgttaaagtatttgctcttggtggagtaggtgaaatc
gggaaaaacatgtactgtgttgaaattgattctgaaatctttattgtagatgcagggtta
atgttcccgggagatgaaatgtttggaattgatatcgttattcctgatattacatattta
gtggaaaaccaagagcgagtaaaaggtttatttattactcacggtcatgaagatcatatt
ggtggtattgtttacgtacttcgtaaattatctattccagtgtatgcaacgaaattaaca
gtaggacttatacaagaaaaacttggcgaagcaggtatgttaggccgtgtagacttaaaa
acaatcgattcaaattcaacagtagagtttaatactacaacggtgtcattctttggaacg
acacatagtattccagattctgttggtgtttgtttccatacatcaaaaggtgcgatcgta
tatacgggagactttaaattcgatcaaactccaattggaaatagtggagcagatcttggg
aaaatggctcaaatcggaaatgaaggtgtactatgcctattatctgatagtacaaatgct
gagcgtccaggctatacaggttctgaaaaagaagttggtgtagaaatttctaaagtattc
tacggcgcagaaggacgtattatcgttgcttcatttgcatcgaatgtacatcgtattcaa
caagtatttgatgcagctgctgaaacaggacgaaaagtcgcggttgtaggacgtagtatg
gtgaaagtagtagatatcgcaagacgccttggttatttagatgttccagaaggtatggtt
atttcactacaagaagtagacaatttcccagagaaaaaggtagctattttaacgacaggt
agccaaggcgaaccgatggcagccctttctagaatggcgaagcaagctcataaacaaatt
tcaattcgtaaaggtgatacggttattattgcggcttctccaattccgggtaatgaaata
tctgtatcgaaaattattgacttgttatttagagctggagctgaagttgtttattatggt
gaaagaaaagttcacgtttcaggtcatggtagccaagaagaattaaaactaatgttaaac
ttaatgaaaccgaaatattttgtacccgtacatggtgagtttcgtatgcaaaaagcacat
gcatacttagctgaagatgtaggtattgcaagagaaaatatctttatcgtagaaaaaggc
gatgtaattggttttggtgacgatgaagcaaatttagttggtaaagtgcaagcgggcaat
gtattaattgatggattaggtgtaggtgacgttggtaatatcgttcttcgagatagaaaa
atgttatctcaagatggaatattagtagttgttgtaacacttggtaaagatgaaaagaaa
attatctctggtccagaaatcatttcgcgtggatttgtatatgttcgtgaatcagaagcg
ttaattgaccgttctacagagattgtacgtatgattgttgagcaatcaattaaagaatat
tcaattgaatggtctatgttaaaacaaaatattcgtgaattattgggacagttcttgtac
gaagagacaaagagaaaacctatgattttaccgattattatggaagtataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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