KEGG   Burkholderia ubonensis: BW23_1144
Entry
BW23_1144         CDS       T03794                                 
Symbol
ffh
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
bub  Burkholderia ubonensis
Pathway
bub02024  Quorum sensing
bub03060  Protein export
bub03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bub00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    BW23_1144 (ffh)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BW23_1144 (ffh)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BW23_1144 (ffh)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bub02044]
    BW23_1144 (ffh)
Enzymes [BR:bub01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     BW23_1144 (ffh)
Secretion system [BR:bub02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   BW23_1144 (ffh)
  Eukaryotic Sec-SRP protein
   BW23_1144 (ffh)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 Zeta_toxin AAA_31 APS_kinase nSTAND3 AAA_16 AAA_33 AAA_18 cobW Mg_chelatase AAA_30 ResIII YqeC CPT AAA_14 Helicase_RecD NACHT Thymidylate_kin KTI12 TsaE
Other DBs
NCBI-ProteinID: AJX17860
Position
I:1230962..1232329
AA seq 455 aa
MLDNLTQRMARVVKTLRGEARLTEANTQEMLREVRLALLEADVALPVVREFIAKVKEKAL
GEEVISSLSPGQALVGVVQKELTAVIGGDYEGKAAELNLAVTPPAVILMAGLQGAGKTTT
AGKLAKLLREKYKKKVLTVSCDVYRPAAIMQLKTVSEQVGADFFPSTPDQKPVDIALAAV
DWAKRHYHDVLIVDTAGRLGIDEAMMQEIAALHATLKPAETLFVVDAMLGQDAVNTAKAF
NDALPLTGVVLTKLDGDSRGGAALSVRHITGKPIKFVGVAEKLDGLEIFHPDRMANRILG
MGDILALVEEAQRGVDVQAAQKLADKVKKGGDFDLNDFRAQISQMKNMGGLSSLMDKLPA
QFQQAAAGADMGQAEKQIRRMEGIISSMTPAERAKPEIIKATRKRRIAAGAGVPVQEVNR
MLNQYDQMRTMMKKLKGGNMQKMMRGLKGMMPGLR
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgctcgacaatctcactcaacggatggcgcgcgtcgtcaagacgctgcgcggcgaggcc
cggctcaccgaggcgaacacccaggagatgcttcgcgaggtgcgcctcgcgctgctcgag
gccgacgtcgcgctgcccgtcgtccgcgaattcatcgccaaggtcaaggaaaaagccctc
ggcgaggaagtgatcagcagcctgtcgccgggccaggcactcgtcggcgtggtccagaag
gagctgaccgccgtgatcggcggtgactacgagggcaaggccgccgagctgaacctcgcc
gtcacgccgcccgcggtgatcctgatggccggcctgcagggcgcgggcaagaccaccacc
gccggcaagctcgcgaagctgctgcgcgagaagtacaagaagaaagtgctgacggtgtcg
tgcgacgtgtaccgccccgccgcgatcatgcagctgaaaacggtgagcgaacaggtcggc
gccgacttcttcccgtcgacgccggaccagaagccggtcgacatcgcgctcgccgcggtc
gactgggcgaagcgccactaccatgacgtgctgatcgtcgacacggccggccgtctcggc
atcgacgaagcgatgatgcaggagatcgccgcgctgcacgccacgctcaagcctgccgaa
acgctgttcgtcgtcgacgcgatgctcggccaagatgcggtcaacaccgcgaaggcgttc
aacgacgcgctgccgctcaccggcgtcgtgctgaccaagctcgacggcgactcgcgcggc
ggcgccgcgctgtcggtgcgccacatcaccggcaagccgatcaagttcgtcggtgtcgcc
gagaagctcgacggcctcgagatcttccacccggaccggatggcgaaccggatcctcggc
atgggcgacatcctcgcgctcgtcgaggaagcgcagcgcggcgtcgacgtgcaggccgcg
cagaagctcgccgacaaggtgaagaaaggcggcgacttcgacctgaacgatttccgcgcg
cagatctcgcagatgaagaacatgggcggcctgtcgtcgctgatggacaagctgcccgcg
cagttccagcaggcggcggccggcgccgacatgggccaggccgaaaagcagatccgccgg
atggaagggatcatcagctcgatgacgcccgccgagcgcgcgaaacccgagatcatcaag
gcgacgcgcaagcgccgcattgccgccggcgcgggcgtgccggtgcaggaagtcaaccgg
atgctgaaccagtacgaccagatgcgtacgatgatgaagaagctgaagggcggcaacatg
cagaagatgatgcgcggcctgaagggcatgatgcccggcctgcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (24)   
   Pfam (24)   
All databases (35)   

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