KEGG   Burkholderia sp. CCGE1001: BC1001_2445
Entry
BC1001_2445       CDS       T01424                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
bug  Burkholderia sp. CCGE1001
Pathway
bug03420  Nucleotide excision repair
bug03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bug00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BC1001_2445
   03430 Mismatch repair
    BC1001_2445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bug03400]
    BC1001_2445
Enzymes [BR:bug01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BC1001_2445
DNA repair and recombination proteins [BR:bug03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BC1001_2445
   MMR (mismatch excision repair)
    Other MMR factors
     BC1001_2445
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_12 PcrA_UvrD_tudor AAA_30 Viral_helicase1
Other DBs
NCBI-ProteinID: ADX55861
Position
1:complement(2790203..2792566)
AA seq 787 aa
MPDLLANLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQHGLASPATILAVTF
TNKAAREMMSRLSALLPIDTRGMWIGTFHGLCNRMLRAHHRDAGLPATFQILDTADQLSA
IKRLMKGLNIDDEKYPAKNLQYFINNAKEQGLRPKDVDATDNFNRKFVELYEAYDQQCQR
EGVVDFPELLLRCYELLAHNPPLRAHYQARFRHILVDEFQDTNKLQYAWLKLLAGQTNAI
FAVGDDDQSIYAFRGANVGNMRDFEHEFNVRHLIKLEQNYRSHGHILDAANQLIANNSRR
LGKNLRTDAGHGEPVRVYESATDTQEAGWIVEEIKALISTGTSRSEIAVLYRSNAQSRTI
EHTLVNAGIAYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSI
EQLADAARLYNCSMAAAIPYVAGKAGSSLSAFANLIGKMRAETQQMSLPETVEYVVRASG
LADFYQNEREGQDRLENLQELVNAAAAFVSEEGYGMDTPARSIPLRPGATAAPELAVATD
DPNTVVLDAPGIADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQEAVQLMTVHAAKGLE
FTAVFITGLEEGLFPHENSAMESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NIRSRFFDELPQETLKWLTPKVEAGARWGGRSDNAGYGRDWFARPDRQQGYGGGTSAPAA
PLPAFANEQRAAETGFRVGQQVFHTKFGEGTITALEGGGTDAKAQVKFKRHGEKWLALAV
AKLQAVE
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgcccgacctgctagccaatctcaaccccgaacaacacgccgccgtcacgctccccaat
gagcccgcgctgattctcgccggcgcgggcagcggcaaaacccgcgtactcatcacgcgc
atcgcgtggctcatccagcatggccttgcgtcgcctgccaccattctggccgtgaccttc
accaacaaggccgcgcgcgaaatgatgtcgcgcctttcggcgctgttgcccatcgacacg
cgcggcatgtggatcggcaccttccacggcctgtgcaaccgcatgctgcgcgcgcatcat
cgcgacgccggtctgcccgccacgttccagattctcgacaccgcggatcaactttccgcg
atcaagcgtctgatgaagggcctgaacatcgacgacgaaaagtacccggccaaaaacctc
cagtacttcatcaacaacgcgaaggaacagggcctgcggccgaaagacgtcgacgccacc
gacaatttcaaccgcaaattcgtcgaactctacgaagcctacgaccagcagtgccagcgc
gaaggcgtcgtcgatttccccgagctgctgctgcgctgctatgaactgctcgcgcacaat
ccgccgttgcgcgcgcactatcaggcgcgcttcaggcacattctcgtcgacgagtttcag
gacaccaacaagctgcaatacgcgtggctgaagctgctcgcgggtcagacgaacgcgatt
ttcgcggtcggcgacgacgaccagtccatttacgcgttccgcggcgcgaatgtcggcaac
atgcgcgacttcgagcacgagttcaatgtccggcatctgatcaagctcgaacagaattac
cgctcgcacggccatattctcgacgccgccaaccagctgatcgcgaacaattcgcggcgt
ctcggcaagaatctgcgcacggacgcaggccacggcgagccggtgcgcgtctacgaatcc
gccacggacacgcaggaagccggctggatcgtcgaagaaatcaaggcgctcatcagcacc
ggcacctcgcgcagcgaaatcgcggtgctctatcgcagcaacgcgcagtcgcgcaccatc
gagcacacgctcgtgaatgcgggcattgcgtaccgcgtgtatggcggtttgcgctttttc
gagcgtcaggaagtgaagcacgcgctcgcctatctgcgcctgatcgacaatccgaacgac
gacacggcgttcgcgcgcgtcgtcaattttccgacgcggggtatcggcgcgcgctccatt
gagcagcttgccgacgccgcgcggctctacaactgctcgatggccgcggcgattccgtac
gtcgccgggaaagcggggtcgagcctgtcggcgtttgccaacctgatcggcaagatgcgc
gcggaaacgcagcagatgagcctgccggaaaccgtcgaatacgtggtgcgcgcaagcggc
ctcgccgatttttatcagaacgagcgggaaggccaggaccggctggagaacttgcaggaa
ctggtcaatgcagcggcggcgttcgtcagcgaagagggctacggcatggacacgcccgcg
cgctccattccgctgcgccccggcgcgaccgccgcgccggaactggccgtcgccaccgac
gaccccaacaccgtcgtgctggacgcgcccggcatcgcggacccggcgcaaaaccccgac
accatgacgccgctcgccggcttcctgtcgcacgcgtcgctcgaagcgggcgacaaccag
gcgcaagccggccaggaagccgtccagctgatgacggtgcacgcggccaagggtctggaa
ttcacggctgtgttcatcacgggcctcgaagaggggctcttcccgcacgagaacagcgcg
atggagtcggacgggctcgaggaagagcgccgtctcatgtatgtggccattacgcgcgcg
aaggaacggctgtacctgtcgttcgcgcaaagccggatgctgcacggccagacgcgctac
aacatccgctcgcgtttcttcgacgaattgccgcaggaaacgctcaagtggctcacgccg
aaggtcgaggcgggcgcgcgctggggcggccgctcggataacgcgggctatgggcgcgac
tggttcgcgcggcccgaccgtcagcagggctacggcggcgggacttcggccccggcggcg
ccgttgccggctttcgccaacgagcagcgcgcggcggaaaccggtttccgcgtcggccag
caggtgttccacaccaagttcggcgagggcacgatcactgcgctcgaaggcggcggcacc
gatgccaaggcacaggtcaaattcaagcgccacggcgagaaatggctcgcgctcgcggtc
gcgaaattgcaggcggtcgaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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