KEGG   Buchnera aphidicola Ua (Uroleucon ambrosiae): BUAMB_032
Entry
BUAMB_032         CDS       T01830                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
buh  Buchnera aphidicola Ua (Uroleucon ambrosiae)
Pathway
buh03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:buh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BUAMB_032 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:buh03021]
    BUAMB_032 (rpoC)
   03400 DNA repair and recombination proteins [BR:buh03400]
    BUAMB_032 (rpoC)
Enzymes [BR:buh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BUAMB_032 (rpoC)
Transcription machinery [BR:buh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BUAMB_032 (rpoC)
DNA repair and recombination proteins [BR:buh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BUAMB_032 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-ProteinID: AEO07866
UniProt: G2LNS9
Position
complement(35655..39875)
AA seq 1406 aa
MKDLLKFLKSQTKNEDFDAIKISLASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQSKVRRERMGHIELSSPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVIETGMTNLEKHQILTEEQYVDALEEFGDEFHATM
GAEAIQYLLKDINLVQVCNTLRLELNETNSETKRKKLTKRIKLLESFIQSHNKPEWMILN
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LHLHQCGLPKKMALELFKPFIYGKLEVRSLATTIKAAKKMVEREESVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLESQLES
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTREKINSKGEGMLLNSSNEAEKVYHLG
IAELHAAVKVRIIEYKKNEDNSFTPRKKIVSTTIGRAILWMIIPKGLPFSIINQTLGKKD
ISKMLNTCYRILGIKPTVFFADQIMYTGFAYAARSGSSVGIDDMVIPEKKANIISEAEIE
VAEIQEQFQSGLVTSGERYNKVIDIWAAANERVAKAMMKNLSTESVINKIGSKQTQISFN
SIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTQDDCQTHEGILMTPLIEGGDVKEPLRERVL
GRVTAKNINIPNTKNILIERNTLLNEQLCDLLQKNSIDTVKVRSVVNCDTDFGVCAYCYG
RDLARGNLVNKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAASESSIQVRTQGMINL
NNAKSVKNSNGKIVITSRNVSLNIIDNFGRTQESYKIPYGAIMAKGAGEQVNSGETVAKW
DPHTIPVITEVNGFVRFVDMIDGQSITRQADELTGLSSIVILDTAERMSIGKDLRPALKI
IDHHGHDVLISGTDMPAQYFLPGKAIVQLEDGVKISSGDTLARVPQESGGTRDITGGLPR
VADLFEARRPKESAILAEINGIISFGKETKGKRRLIITPVNGNDAYEEMIPKWRQLNVFE
GERVEKGDIISDGPESPHDILRLRGVQAVTKYIVNEVQEVYRLQGVKINDKHIEVIIRQM
LRKATILKSGDSTFLDGEQVEFSRIKMSNRILEKNNKIPATFLRDLLGITKASLATESFI
SAASFQETTRVLTESAVAGKKDELRGLKENVIVGRLIPAGTGYAYHKERLNRRQKKHHPM
ISSSHVSAEEASASLSELLNSTLTEK
NT seq 4221 nt   +upstreamnt  +downstreamnt
gtgaaagatttactaaaatttcttaaatctcaaactaaaaatgaagattttgatgccatt
aaaatttcattagcttctcctgatatgataagatcttggtcatttggtgaagttaaaaag
cctgaaactattaattaccgaacatttaaacctgaacgagatggattattttgtgctcgt
atttttggtccagtaaaagattatgaatgtttatgtggtaaatacaaaagattaaaacat
agaggcgtaatttgtgaaaaatgtggtgtagaagtaacacaaagtaaagtcagacgagaa
cgaatgggtcatatagaattatcatcccctacagctcatatttggtttttaaaatcttta
ccatcaagaataggattactattagatatgcctcttagagacattgaaagagtgttatat
tttgaatcttatgtcgttatagaaacaggtatgactaatcttgaaaaacatcaaatttta
actgaagaacaatatgtcgatgcattagaagaatttggagatgaatttcatgctactatg
ggagcagaagcaattcaatacttattaaaagatatcaatttagttcaagtatgtaataca
ttaagactagaattaaacgaaacaaattctgaaacaaaacgaaaaaaactaacaaaacga
attaaattattagaatcttttattcaatctcataataaacctgaatggatgattcttaac
gtattaccagtactaccaccagatctcagaccattagtaccactagatggaggaagattt
gcaacgtcagatttaaacgatttatatcgtcgagtaattaatagaaataatcgtctaaaa
cgtttattagatttagctgcaccagatattattgtaagaaatgaaaaaagaatgttgcaa
gaagcagtagatgctttattagataatggaagaagagggcgagcaattactggttcaaat
aaaagacctcttaaatcattagctgatatgattaaaggtaaacaaggaaggtttcgacaa
aatcttcttggaaaacgtgtagattattctggtcgttcagttattactgtcggtccctac
cttcatttacatcaatgtggattacctaaaaaaatggcattagagctatttaagccattt
atatatggaaaattagaagtacgtagtttagcaactactatcaaagcagcaaaaaaaatg
gtagaaagagaagaatcagtagtctgggatattttagatgaagtaattcgcgaacatcca
gttttattaaatcgcgcacctactttacatagattaggtatacaagcatttgaaccagtt
cttatagaaggcaaagctattcaactacatcctttagtatgtgcggcttataatgctgat
tttgatggtgatcaaatggctgtacatgtccctcttactctagaatcacaattagaatct
agagccttaatgatgtcaacaaataatatactatctccagctaatggagagccaattatc
gtaccttctcaagatgttgtattaggtttatattatatgactcgcgagaaaattaatagc
aagggcgaaggtatgttattaaacagctctaatgaagcagaaaaagtatatcatttagga
attgctgaattacatgctgcagttaaagtacgaataatagaatataaaaaaaatgaagat
aacagttttactccaagaaaaaagatagtgtctactacgattggacgagcgattttatgg
atgattattccaaaaggacttccttttagtatcatcaatcaaactttaggaaaaaaagat
atctctaaaatgctgaatacttgttatcgtattttaggcattaaacctactgtatttttt
gctgatcaaattatgtataccggttttgcttatgcagcacgatcaggatcttcagttggt
attgatgatatggtgatacctgaaaaaaaagcaaatattatcagtgaagcagaaattgaa
gtagctgaaatacaagaacaatttcaatcaggattagtaacatcaggtgaaagatataac
aaagtgattgatatttgggcagcagcaaatgaacgtgtagcaaaagctatgatgaaaaat
ttatctacagaatctgtgattaataaaataggttcaaaacaaacacaaatatcttttaat
agtatatttatgatggcagattcaggagcaagaggttctgctgcacaaattcgtcaatta
gctggtatgagaggtttaatggctaaaccagatggttctattattgaaacaccaattaca
gctaattttcgagaaggtttaaatgtattgcaatattttatttctactcatggagcacga
aaaggattagcagacactgctttaaaaactgctaattctggatatttaacacgtcgttta
gtagatgttgcgcaagacttagttgtcacacaagacgattgtcaaacacatgaaggaatt
ttaatgacaccattaattgaaggaggagatgttaaagaacctttacgtgaacgagtatta
ggacgagtcactgcaaaaaatattaatattcctaatactaaaaatattttaattgaaaga
aatacattacttaatgaacaattatgtgatcttctacaaaaaaattctatagatactgtt
aaagtaagatcagtagtaaactgtgatactgattttggtgtctgtgcttattgttatggt
cgtgatttagctcggggtaatttagtaaataaaggtgaagctattggagtcattgctgct
caatctataggagagcctggtacacaattaactatgagaacttttcacattggaggagcc
gcatcaagagcagcatcagaatctagtattcaagttagaactcagggtatgattaatctt
aataatgctaaatctgtaaaaaattctaatggaaagattgttattacttctagaaatgtt
tcactaaacattattgataattttggacgaactcaagaaagttataaaattccttatgga
gcaattatggccaagggagctggtgaacaagttaattctggagaaactgttgcaaaatgg
gatccacatactattccagtcattactgaagttaatggttttgtgcgatttgtagatatg
atagatggtcagagtattaccaggcaagctgatgaattaacaggtttatcgtctatagta
atattagatacagcagagagaatgtctattggtaaagatttaagacctgcattaaaaatt
attgatcatcatggtcatgatgtactaatttcaggaacagacatgcctgcacaatatttt
ttacctggaaaagctattgttcaacttgaagatggggtaaaaattagctctggtgataca
ttagcaagagtaccacaagaatcaggaggaactagagatattactggtggcttaccaaga
gtagcagatttatttgaagctagacgtccaaaagaatcagcaattttagcagaaattaat
ggtatcatatcttttggaaaagaaacaaaaggaaaaagacgattaattattactccagtt
aatggtaatgatgcttatgaagaaatgattccaaaatggagacaattaaatgtttttgaa
ggagaacgagtagaaaaaggtgatattatatctgatggaccagaatcaccacatgatatt
ttaagactcagaggagttcaagcagtaacaaaatatattgttaatgaagtccaagaagta
tatcgacttcaaggtgtaaaaattaatgataaacatattgaagtcattattagacaaatg
ttaagaaaagctactatattaaaatcaggagattcaacgtttttagatggcgagcaagta
gagttttcacgcattaaaatgtctaatcgtattttagaaaaaaataacaagatacctgct
acttttttaagagacttgttaggtattacaaaggcatcacttgcaacagaatcttttata
tctgccgcttcttttcaagaaacaacaagagtattaactgagtctgcagtcgcaggaaaa
aaagacgaacttagaggtttaaaagaaaatgtaattgtcggacgtttaattcctgcaggg
acaggatatgcatatcataaagaacgtttaaatcgtagacaaaaaaaacatcatccaatg
attagtagttctcacgtgagtgcagaagaagcttctgctagtctttcagaattattaaat
tctactctcacagaaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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