KEGG T02110: MYA

Burkholderia sp. KJ006: MYA_1608

Entry

MYA_1608          CDS       T02110

Name

(GenBank) 23S rRNA (Uracil-5-) -methyltransferase RumA

K03215

23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

Organism

buk Burkholderia sp. KJ006

Brite

KEGG Orthology (KO) [BR:buk00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:buk03009]
    MYA_1608
Enzymes [BR:buk01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     MYA_1608
Ribosome biogenesis [BR:buk03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    MYA_1608

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_31 Methyltransf_25 Cons_hypoth95 TRAM Met_10 Methyltransf_15 RrnaAD Methyltransf_23 Methyltransf_11 MTS Methyltr_RsmB-F PCMT N6_N4_Mtase

Other DBs

NCBI-ProteinID:

AFJ85969

UniProt:

I2DMU3

Position

1:complement(1732788..1734116)

AA seq 442 aa
MLEIESLDMEARGVGRTATEDGTPGKVIFVEGALPGERVTYSSYRRKPSYEQATVVDILR
PSVMRTKPKCEFFGTCGGCSMQHLDMRAQVAIKQRVLEDNLWHLSKLRAEAMYAPIHGPS
WGYRYRARLTVRNVAKKGGVLVGFHEKKSSYVADMTSCEVLPPHVSAMLVPLRRLVEGLS
IRDRMPQIELAVGSQVTALVLRVLEPINADDEALLRAFADEHNVQFWLQPKGPDTVAPFY
PLDVALDYTLPEFGIRMPFKPTDFTQVNHQINRVLVGRALRLLAPSRDDRVLDLFCGIGN
FTLPLARLAREVMGIEGSETLTTRALANARENGVDGHTTFACRNLFEVTGDDLRALGAFD
KFLIDPPREGALAVSKALAEIAQSGEGPLPKRIVYVSCNPSTLARDAGLLVHEAGYRLKG
AGVVNMFPNTSHVESIALFERA

NT seq 1329 nt +upstreamnt +downstreamnt
gtgctcgagatcgaatcgctcgacatggaagcgcgcggtgtcggccgcacggcgaccgag
gatggcacgcccggcaaggtgatcttcgtcgaaggcgcgctgcccggcgagcgcgtgacc
tattcgagctatcgccgcaagccgagctacgagcaggcgaccgtcgtcgacattctgcgc
ccgagcgtgatgcgcacgaagccgaaatgcgaatttttcggcacctgcggcggctgttcg
atgcagcacctcgacatgcgcgcgcaggtggcgatcaagcagcgcgtgctcgaggacaac
ctgtggcatctgtcgaagctgcgcgccgaggcgatgtacgcgccgatccacggcccgtcg
tggggctatcgctaccgcgcgcgcctgaccgtgcgcaacgtcgcgaagaagggcggcgtc
ctggtgggcttccacgaaaagaagagcagctacgtcgccgacatgacgagctgcgaagtg
ctgccgccgcacgtgtcggcgatgctggtgccgctgcgccggctggtcgagggcctgtcg
atccgcgatcggatgccgcagatcgagctggcggtcggctcgcaggtgaccgcgctggtg
ttgcgcgtcctggagccgatcaatgccgacgacgaagcgctgctgcgcgcgttcgcggac
gagcacaacgtgcagttctggctgcagccgaagggccccgacacggtcgcgccgttctat
ccgctcgacgtggcgctcgactacacgctgccggagttcggcatccgcatgccgttcaag
ccgaccgacttcacgcaggtcaaccatcagatcaatcgcgtgctggtcgggcgtgcgctg
cgtctgctcgcgccgtcgcgcgacgatcgcgtgctcgacctgttctgcgggatcggcaac
ttcacgctgccgctggcgcgcctggcgcgcgaggtgatgggcatcgagggcagcgaaacg
ctgacgacgcgcgcgctcgcgaatgcgcgcgagaacggcgtcgacggccatacgacgttc
gcgtgccggaacctgttcgaagtgacgggcgacgatctgcgcgcgctcggcgcgttcgac
aagttcctgatcgacccgccgcgcgaaggcgcgctcgcggtgtccaaggcgctcgccgag
atcgcgcagagcggtgaaggcccgctgccgaagcggatcgtctacgtgtcgtgcaatccg
tcgacgcttgcgcgcgacgccgggctgctcgtccacgaggccggttatcggctcaagggc
gccggcgtggtgaacatgttcccgaatacgtcgcacgtcgaatcgatcgcgctgttcgag
cgcgcttga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (23)   

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