KEGG   Burkholderia sp. 2002721687: BW21_422
Entry
BW21_422          CDS       T03759                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
bul  Burkholderia sp. 2002721687
Pathway
bul03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BW21_422 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bul03021]
    BW21_422 (rpoB)
   03400 DNA repair and recombination proteins [BR:bul03400]
    BW21_422 (rpoB)
Enzymes [BR:bul01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BW21_422 (rpoB)
Transcription machinery [BR:bul03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BW21_422 (rpoB)
DNA repair and recombination proteins [BR:bul03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BW21_422 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45 RNA_pol_Rpb2_2 UbiD
Other DBs
NCBI-ProteinID: AJY40946
Position
I:448799..452905
AA seq 1368 aa
MQYSFTEKKRIRKSFAKRSIVHQVPFLLATQLESFSTFLQADVLPAQRKSEGLQAAFTSV
FPIVSHNGFARLEFVSYALSSPAFNIKECQQRGLTYCSALRAKVRLVLLDKESPNKPVVK
EVKEQEVYMGEIPLMTPTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSAR
IIPYRGSWLDFEFDPKDVLYFRVDRRRKMPVTILLKAIGLTPELILANFFVFDNFTLMDE
GAQMEFVPERLRGEVARFDITDREGKVIVQKDKRINAKHIRDLETAKTKYISVPEDYLLG
RVLAKNVVDGDTGEVIANANDEITEGVLEKLREAKIKEIQTLYTNDLDQGPYISSTLRVD
ETVDRTAARIAIYRMMRPGEPPTEEAVEALFNRLFYSEDAYDLSKVGRMKFNRRVGRDEI
TGPMTLQDDDILATIKILVELRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLVRVERA
VKERLGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAHLNEYGFLETPYRKV
ADSKVTDQIDYLSAIEEGRYMIAQANAAIGEDGTLVDELVSSREAGETMMVTPDRIQYMD
VAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKPVVGTGIERTVAVDSGT
TVQALRGGVVDYVDAGRIVIRVNDDEAAAGEVGVDIYNLIKYTRSNQNTNINQRPIVKMG
DKVSRGDVLADGASTDLGELALGQNMLIAFMPWNGYNFEDSILISERVVADDRYTSIHIE
ELNVVARDTKLGPEEITRDISNLAEVQLGRLDESGIVYIGAEVEAGDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGIQRDKRAQQIIDDELK
RYRLDLNDQLRIVEGDAFQRLARMLVGKVANGGPKKLAKGTKIDQAYLEDLDHYHWFDIR
LADDEAAAQLEAIKNSIEEKRHQFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRLQ
PGDKMAGRHGNKGVVSKIVPVEDMPYMADGRPADVVLNPLGVPSRMNVGQVLEVHLGWAA
KGLGWRIGEMLQRQAKIEELRVFLTKIYNESGRAEDLESFTDDEILELAKNLREGVPFAT
PVFDGATEEEMSKMLDLAFPDDIAEQLDMNPSKNQVRLYDGRTGEPFERRVTLGYMHYLK
LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVK
SDDVTGRTKVYENLVKGDHVIDAGMPESFNVLVKEIRSLGIDIDLDRN
NT seq 4107 nt   +upstreamnt  +downstreamnt
atgcaatattccttcaccgagaagaagcgtattcgcaagagtttcgcgaagcgctccatc
gttcaccaagtgcctttcctgctggccacccagcttgaatcattcagcacatttctgcaa
gccgatgtgctgcccgcgcaacgcaagtccgaggggttgcaggccgccttcacatcggtg
tttcccatcgtctcgcataacggcttcgctcgtctcgagtttgtgagctatgcgttgtcg
tcgccggcattcaacatcaaggaatgccagcagcgcggcctgacctattgctcggcattg
cgcgcgaaggtgcgcctcgtgctcctcgacaaggagtcgccgaacaagcccgtcgtcaag
gaagtgaaggaacaggaagtgtacatgggcgaaattccgctcatgacgccgaccggttcg
ttcgtcatcaacggcaccgagcgcgtgatcgtgtcgcagttgcaccgttcgcccggcgtg
ttcttcgagcacgacaagggcaagacgcacagctcgggcaagctgctgttctccgcgcgg
atcattccgtaccgcggttcgtggctcgacttcgaattcgatccgaaggacgtgctgtac
ttccgcgtcgaccgtcgtcgcaagatgccggtcacgatcctgctgaaggcgatcggcctc
acgccggagctgatcctcgcgaacttcttcgtcttcgacaacttcacgctgatggacgaa
ggcgcgcagatggagttcgtgcccgagcgcctgcgcggtgaagtggcccgcttcgacatc
accgatcgcgaaggcaaggtcatcgtccagaaggacaagcggatcaacgcgaagcacatt
cgcgatctcgaaaccgcgaagaccaagtacatctcggtgcccgaagactatctgctcggc
cgcgtgctggcgaagaacgtcgtcgacggcgacacgggcgaagtgatcgcgaacgcgaac
gacgagatcacggaaggcgtgctcgagaagctgcgcgaggcgaagatcaaggaaatccag
acgctctatacgaacgatctggaccaggggccgtacatttcgtcgacgctgcgtgtcgac
gaaaccgtcgacaggacggccgcgcgcatcgcgatctaccggatgatgcgcccgggcgag
ccgccgacggaagaagccgtcgaggcgctcttcaaccgcctgttctacagtgaagacgcg
tacgacctgtcgaaggtcggccgcatgaagttcaaccgccgcgtcggccgtgacgaaatc
accggcccgatgacgctgcaggacgacgacatcctcgcgacgatcaagatcctcgtcgag
ctgcgcaacggcaagggcgaagtggacgacatcgaccacctcggcaaccggcgcgtgcgc
tgcgtcggcgaactggcggaaaaccagttccgcgcgggcctcgtgcgcgtcgagcgcgcg
gtgaaggagcgcctcggccaggccgaaagcgaaaacctgatgccgcacgacctgatcaac
tcgaagccgatttcgtcggcgattcgcgagttcttcggttcgtcgcagttgtcgcagttc
atggaccagaccaacccactgtcggaaatcacgcacaagcgccgtgtttccgcactgggc
ccgggcggtctcacgcgcgagcgcgcgggcttcgaagtccgcgacgtgcacccgacccac
tacggccgcgtgtgcccgatcgaaacgccggaaggtccgaacatcggtctcatcaactcg
ctcgcactgtatgcgcacctgaacgaatacggcttcctcgagacgccgtaccgcaaggtc
gccgacagcaaggtgaccgaccagatcgattatctgtcggcgatcgaggaaggccgctac
atgatcgcgcaggcgaacgccgcgatcggtgaagacggcacgctcgtcgacgaactggtg
tcgtcgcgtgaagccggcgaaacgatgatggtcacgccggaccgcatccagtacatggac
gttgcgccgtcgcagatcgtgtcggttgcggcctcgctgatcccgttcctcgagcacgac
gacgcgaaccgtgcgctgatgggctcgaacatgcagcgtcaggccgtgccgtgtctgcgt
ccggagaagcccgtcgtcggcaccggcatcgagcgcaccgtggcggtcgactcgggcacg
acggtgcaggcgctgcgcggcggcgtcgtcgactatgtcgacgcgggccgtatcgtcatt
cgcgtgaacgatgacgaagcggccgcgggcgaagtcggcgtcgacatctacaacctgatc
aagtacacgcgttcgaaccagaacacgaacatcaaccagcgtccgatcgtgaagatgggc
gacaaggtctcgcgcggcgacgtgctggccgacggcgcgtcgacggacctgggcgagctc
gcgctcggccagaacatgctgatcgcgttcatgccgtggaacggctacaacttcgaggat
tcgatcctgatctcggagcgtgtcgtcgcggacgatcgctacacgtcgatccacatcgaa
gagctgaacgtggtcgctcgcgacacgaagctcgggccggaagaaatcacgcgcgacatc
tcgaacctcgcggaagtccagctcggccgtctcgacgaatcgggcatcgtgtacatcggc
gcggaagtcgaagcgggcgacgtgctggtcggcaaggtcacgccgaagggcgaaacccag
ctcacgccggaagagaagctgctgcgcgcgatcttcggcgagaaggcgtcggacgtgaag
gacacgtcgctgcgcgtgccgtcgggcatgagcggcacggtgatcgacgtccaggtcttc
acgcgtgaaggcatccagcgcgacaagcgcgcgcaacagatcatcgacgacgaactgaag
cgctaccgtctcgacctgaacgaccagctccgcatcgtcgaaggcgacgcgttccagcgt
ctcgcgcgcatgctcgtgggcaaggtcgctaacggcggtccgaagaagctcgctaagggc
acgaagatcgaccaggcctacctggaagacctcgaccactatcactggttcgacatccgc
ctggcggacgacgaagcggccgcccagctcgaagcgatcaagaactcgatcgaagagaag
cgccaccagttcgacctcgcgttcgaagagaagcgcaagaagctcacgcaaggcgacgaa
ctgccgccgggcgtgctgaagatggtcaaggtgtacctcgcggtgaagcgccgtctgcag
cccggcgacaagatggccggccgtcacggtaacaagggcgtcgtgtcgaagatcgttccg
gtcgaagacatgccgtacatggccgacggccgtccggccgacgtcgtgctgaacccgctc
ggcgtgccgtcgcggatgaacgtgggtcaggttctggaagtgcatctcggctgggccgcg
aagggcctcggctggcgtattggcgaaatgctgcaacgtcaggcgaagatcgaggagctg
cgcgtgttcctgacgaagatctacaacgagtcgggccgcgcggaagatctggaaagcttc
accgacgacgagatcctcgagctcgcgaagaacctgcgcgaaggcgtgccgttcgcgacg
ccggtgttcgatggtgcgaccgaggaagaaatgtcgaagatgctcgacctcgcgttcccg
gacgacatcgccgaacagctcgacatgaacccgtcgaagaatcaggtgcgcctgtacgac
ggccgcacgggcgagccgttcgagcgccgcgtgacgctcggctacatgcactacctgaag
ctgcaccacctcgtcgacgacaagatgcacgcgcgctcgacgggcccgtactcgctcgtc
acgcagcagccgctcggcggcaaggcgcagttcggcggccagcgtttcggtgaaatggaa
gtgtgggcgctcgaagcgtatggcgcttcgtacgtgctgcaggaaatgctgacggtgaag
tcggacgacgtgaccggccggaccaaggtttatgaaaacctggtcaagggcgaccatgtc
atcgatgccggcatgcccgagtcgttcaacgtgttggtgaaggaaatccggtcgctcggt
atcgacatcgacctggaccggaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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