KEGG   Burkholderia sp. HB1: AC233_07485
Entry
AC233_07485       CDS       T04094                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
buq  Burkholderia sp. HB1
Pathway
buq03030  DNA replication
buq03430  Mismatch repair
buq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:buq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AC233_07485
   03430 Mismatch repair
    AC233_07485
   03440 Homologous recombination
    AC233_07485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:buq03032]
    AC233_07485
   03400 DNA repair and recombination proteins [BR:buq03400]
    AC233_07485
Enzymes [BR:buq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AC233_07485
DNA replication proteins [BR:buq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AC233_07485
DNA repair and recombination proteins [BR:buq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AC233_07485
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_5 AAA RuvB_N AAA_16 AAA_22 AAA_14 AAA_5 DUF3646 AAA_18 Mg_chelatase AAA_assoc_2 TsaE AAA_2 AAA_24 HTH_20 Glyco_tranf_2_5 PIF1
Other DBs
NCBI-ProteinID: ALE54575
Position
1:1732097..1735117
AA seq 1006 aa
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFSK
ALNCETGVTSTPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLEHILGEEKVPYEAQALRLLARAADGSMRDALSLTDQAIAYSANQVNEEAVRGM
LGALDQSYLIRLLDALAQGDGATVLTIADEMALRSLSFSTALQDLASLLHRIAWAQFAPS
SVLDEWPEAGDLRRFAETLSAEQVQLFYQIATIGRSELGLAPDEYAGFTMTLLRMLAFEP
APTGGGGGVGGSGVQAGQAGAGGSKRAGAPAVAAQPRALASPGSVASMGGAGRAGVGGVA
AAASPVASPVDESRDVAAKVSSEPAALAEPVRRADSMEPAGRDAQSAAGQDGGNAAERVG
RGLAHTAAAAASESAVEAASSSVVESAELERSAASAPASAPSSATPAAAQAAAAPPLAPW
EDAPAEPVANGSAAPDAPAALASASASTASSDAAQASTARPSDAAQVSAAGSSEAASATG
SSEVGQASATASSDAGQASSAPTPLNTAQPSAPDTATTTASDSASTDTKLAEDAPPAALN
PPAAAAFARASEAVDQAAGHNAAAAESEMPPRRAGGASAALDVLRSAGLKVSSDRGRASA
ATAAKTAAPATPKPAAPRVVVPVPTPGAPRGAAAQQPPASTVRASAQSAQSTQPPQPAQP
ARSAQSAQSAPRNDAQQNGSPVPPWDDMPPDDYMPLSASDDGYYGPPDDNYMPVFDSGPD
DVRVNASAPSAPAPAVDRRPLPSAVPLDPLGFNGDWPALAVDLPLKGISYQLAFNSELMA
LEGNTLKLNVPVPQYAETSQVAKLKAALADKLGQHVDVVVEVGPARRTAAAHDAAMRAQR
QQEAEREISADPFVQSLIREFDASIVPGSIRPITPDAGQNGASQVH
NT seq 3021 nt   +upstreamnt  +downstreamnt
atgacctatcaagttctcgcacgcaaatggcggccgaaggatttcgcgtcgctcgtcgga
caggagcacgtggtgcgcgcgctcacgcacgcgctcgacggcggccgtctgcatcacgcc
tatctgtttaccggcacgcggggcgtcggcaagacgacgttgtcgcgcattttttccaag
gcgctcaattgcgaaacgggcgtgacgtccacgccgtgcggcgtgtgccgggcgtgccgc
gagatcgatgaagggcgctttgtcgattacgtcgagatggacgcggcgagtaatcgcggc
gtcgacgaaatggcggcgctgctcgagcgcgcggtgtacgcgccggtcgacgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctgacgaatcacgccttcaacgcaatgttg
aagacgctcgaagaaccgccgccgcacgtcaagttcattctcgccaccaccgatccgcag
aagattccggtcacggtgctgtcgcgctgtctgcagttcaatctgaagcagatgccggcc
ggccatatcgtctcgcacctcgaacacattctcggcgaagagaaagtgccttacgaggcg
caggcgttgcgtctgctcgcgcgtgccgccgacggttcgatgcgcgacgcgctttcgctg
acggatcaggcgatcgcgtactcggcgaatcaggtcaatgaagaagccgtgcgcggcatg
ctcggcgcgctcgatcagagctacctgattcgcctgctcgatgcgctcgcgcagggcgac
ggcgcaacggtgctcacgatcgccgacgaaatggcgctgcgcagtctgtcgttctccacg
gcgctgcaggatctcgcgagcttgctgcatcggattgcgtgggcgcagttcgcgccgtcg
tcggtactggacgaatggcccgaagccggcgatttgcggcgtttcgccgagacgctcagc
gccgagcaggtgcagttgttctatcagatcgcgacgatcggacgaagcgagctcggcctc
gcgcccgacgaatacgcgggcttcacgatgacgctgctgcgcatgctggctttcgagccg
gcgccgacgggcggcggtggcggcgtcggcggctctggtgtgcaagccgggcaggcgggc
gcgggtggatcgaagcgggcgggcgcgccggcggtggccgcgcagccacgcgcgttggct
tcgcctgggagtgttgcgtcgatgggcggggcgggcagggcgggggtgggcggcgttgct
gcggctgcgtccccggttgcgtcgccggttgatgagtcgcgagatgtggcagctaaggtg
tcttccgaacccgctgcgttagccgagccggttcgtcgagccgattcgatggagcccgct
gggcgggatgcgcagtccgcagcggggcaggatggcgggaatgcagcggagcgtgtgggg
cgcggcctggcgcacacagcagcggctgcggcgtctgagtcagctgtcgaggccgcctct
tcgtcagtggtagagagcgcagaattggagcgatcggcggcaagtgctccggcgtccgcg
ccgtccagcgcaacgcctgccgcagcgcaggccgctgccgcgccgccgttggcaccgtgg
gaggacgcgccggctgagcccgtagctaacggatccgcggccccggatgcaccggccgca
cttgcatctgcatccgccagcaccgcctcttccgatgcggcgcaggcctccaccgcgcgg
ccttccgacgcggcgcaggtatccgccgccggatcatcggaagcggcatccgccaccgga
tcttcggaagtggggcaggcatccgccaccgcatcttctgatgccggacaggcgtcttct
gcgccgacacctttgaatacggcgcagccgtccgcacccgacacagcaactaccactgca
tccgactccgcctccaccgacacaaagctcgccgaggatgcgcctcccgccgcattgaac
ccgcccgccgccgccgcgttcgcacgcgcgagcgaagcggtcgatcaagccgcaggccac
aacgccgccgcagccgaatctgaaatgccgccgcgtcgcgcgggcggtgcgagcgcagcg
ctcgacgttctgcgcagcgccgggttgaaggtatcgtccgatcgtggccgcgcgagtgcc
gccacggccgcgaaaaccgcggcgccggcaacaccgaagccagccgcgccacgcgtggta
gtccccgtgcccacgcccggcgcgccgcgcggcgctgctgcgcagcagccgcccgcgtcg
accgtgcgcgcgtcagcgcaatcggctcagtcgacgcagccaccgcaaccagcgcaacca
gcacgatcagcacaatcagcgcaatcagcgccccgcaacgacgcgcagcaaaacggctcg
ccggttccgccgtgggacgacatgccgcccgacgactacatgccgctttccgcatcggac
gacggctactacggcccgcccgacgacaactacatgcccgtgttcgacagcggcccggac
gacgtccgcgtgaacgcgtcggcaccgtccgcaccggcaccggccgtcgatcggcgtccg
ctgccgtccgccgtgccgctcgacccgctgggcttcaacggcgactggccggcgctcgcc
gtcgatctgccgctcaagggcatttcgtatcagctcgcgttcaacagcgaactgatggcg
ctcgaaggcaacacgctcaaactcaacgtgcccgtgccgcagtacgcggaaacctcgcaa
gtcgcgaagctcaaggcggcgctcgccgacaagctcggccagcatgtcgacgtggtggtc
gaagtcggcccggcccgccgcactgcagccgctcacgacgccgcaatgcgcgcgcaacgt
cagcaggaagcggagcgcgagatcagcgccgatccgttcgtgcagtcactgatccgcgaa
ttcgacgcgagcatcgtgccgggctcgattcgcccgattactccggacgccggccagaac
ggcgcgtcccaggttcactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (19)   
   Pfam (19)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system