KEGG   Paraburkholderia phytofirmans OLGA172: AYM40_08045
Entry
AYM40_08045       CDS       T05111                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
buz  Paraburkholderia phytofirmans OLGA172
Brite
KEGG Orthology (KO) [BR:buz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:buz03016]
    AYM40_08045 (truB)
Enzymes [BR:buz01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     AYM40_08045 (truB)
Transfer RNA biogenesis [BR:buz03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    AYM40_08045 (truB)
 Prokaryotic type
    AYM40_08045 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2 TruB_C
Other DBs
NCBI-ProteinID: ANB72316
UniProt: A0A160FJZ5
Position
1:1875511..1876446
AA seq 311 aa
MTAPQRPRVPRRALDGVLLLDKPLGLSSNDALIRAKRLYLAKKAGHTGTLDPLATGLLPL
CFGEATKFSQDLLEADKTYEATMRLGIRTTTGDAEGEPIDTRDVTCDQAAVQAAMQTFLG
EIVQVPPMYSALKRDGKPLYEYARAGQTVEREGRLVTIHALEMLACALPDVTFRVTCSKG
TYVRTLAEDIGEALGSGAHLVALRRTGVGALTLENSVTLDALSDATESERDTWLQPVDAL
LSTFPLVTLDEDATRRFLHGQRLKLSELTVTGDAVNAPRVRVYAAEGRLLGVAKQGEGVL
APERLVVTAAS
NT seq 936 nt   +upstreamnt  +downstreamnt
atgaccgcacctcaacgcccccgcgtgccgcgtcgcgcgctcgacggcgtactgctgctc
gacaagccgctcggcctgtcgagcaacgacgcgctgattcgcgcgaagcgtctctacctg
gccaaaaaggcgggccacaccggcacgctcgatccgctcgcgacggggctcttgccgctg
tgtttcggcgaagcgaccaagttttcgcaagatctgctcgaagccgacaagacctatgag
gcgaccatgcgcctcggtatccgcacgaccaccggcgacgccgaaggcgaaccgatcgac
acgcgcgacgtgacctgcgatcaggctgctgtccaggcggcgatgcagacatttctcggc
gagatcgtccaggtcccgccgatgtattcggcgctcaaacgcgacggcaagccgctgtac
gaatatgcgcgcgccggccagacggtcgagcgggaagggcgtctggtgacgattcacgcg
ctcgagatgctggcctgtgcattgcccgatgtgacgtttcgcgtgacgtgcagcaaaggc
acgtatgtgcgcacgcttgccgaggatatcggcgaagcgctcggcagtggtgcgcatctg
gtcgccctgcggcgtacgggcgtcggcgcgctgacgctggagaattcggtgacgctcgac
gcgttgtccgatgcgacggagagcgagcgtgatacgtggctgcagccggtcgatgcattg
ctgtccaccttcccgctcgtgaccctggacgaagacgcgacccgtcgcttcctgcacggt
caacgtctgaaactctcggagttgaccgtcaccggcgacgctgtgaatgcaccccgcgtg
cgcgtgtatgcagcagaagggcgtctgctgggtgtcgcaaagcaaggcgagggcgtattg
gcgcccgagcggctggtcgttaccgcggcgagctag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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