KEGG   Beta vulgaris (sugar beet): 104902059
Entry
104902059         CDS       T03548                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37
  KO
K11594  ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
Organism
bvg  Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:bvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bvg03019]
    104902059
   03041 Spliceosome [BR:bvg03041]
    104902059
   03036 Chromosome and associated proteins [BR:bvg03036]
    104902059
Enzymes [BR:bvg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     104902059
Messenger RNA biogenesis [BR:bvg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     104902059
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104902059
Spliceosome [BR:bvg03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    104902059
Chromosome and associated proteins [BR:bvg03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    104902059
SSDB
Motif
Pfam: DEAD Helicase_C
Other DBs
NCBI-GeneID: 104902059
NCBI-ProteinID: XP_010688023
Position
8:complement(33770118..33775539)
AA seq 634 aa
MAPWTNYDFPSLTSSPRPSSGSTRFSSGSTRFPSGSTRSPSGFSGSHSNHRGGSHRGGRG
GSRGWWGQVGGGGGGERFVDDEPNPFIEEVCEKFDELEVIEESNEIAKNLKNESNMINFD
AYEDIPVEVSGENVPKPVTTFGEIDLGKALNENIKRCKYVKPTPIQRHAIPIVMDGRDLM
ACAQTGSGKTAAFCFPIIAGILKRVPPYRPPLSRGSSGSASGSSGGGGRMICPVSLIMSP
TRELSSQIHDEAKKFAYQTGVKVAVAYGGTPMADQLRKLAKGVDILVATPGRLVDMIERG
KVSLRMVRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGSRQTMLFSATFPTEIQRLAS
DFLKNYIFLTVGKVGSSTDLIEQKVEFVADYNKRQHLKDLLMSQKMNGTNGKQALTIVFV
ETKRGVDDLEYWLSSNGFPATAIHGDKVQWERERALKSFKSGATPIIVATDVAARGLDIP
CVAHVINFDLPRDIDDYVHRIGRTGRAGNSGLATAFFNDKNLGISKALIEIMEDSHQEVP
SWLAEYAGSSSYHENGGGSSGARRSRGGKFGGRDYRSFNQASNGYSGYSDYSNTYSAQVP
SAEPFIDTSAADSCNTPEYRLTHGYESIVASGWE
NT seq 1905 nt   +upstreamnt  +downstreamnt
atggcaccctggaccaactatgattttccttctctcacctcctcacctcgtccctcatct
ggttcgacccgtttttcatctggttcgacccgttttccatctgggtcgactcgttctcca
tctgggtttagtgggtcccactcgaaccatcgaggtgggtcccaccgtggtggtcgtggt
gggtcccgaggttggtggggtcaggtgggtggtggtggtggtggtgagaggtttgttgat
gatgaaccaaacccatttattgaagaagtttgtgagaaatttgatgaactagaagtgatt
gaagagagtaatgaaattgcaaaaaatttgaaaaatgaatcaaatatgataaactttgat
gcatatgaggatatcccagttgaagtaagtggtgaaaatgtgccaaaaccagtaactact
tttggtgagattgatttagggaaagctttaaatgagaacattaagaggtgtaagtatgtt
aaacctaccccaattcaacgccatgctatccccattgttatggatggtagggatttaatg
gcttgtgctcaaactgggtctggaaaaactgccgccttttgttttccaatcattgcaggt
attttgaagagggtgccaccgtatcggccaccattgtctcgtggtagtagtggtagtgct
agtggtagtagtggtggtggtggtaggatgatttgtcctgtttctcttataatgtcacct
actagggagctttcttcccagatacatgatgaggctaagaagtttgcttatcagaccgga
gttaaggtggctgtagcatatggagggacacccatggcggatcagcttcgtaagctggca
aaaggtgttgatattcttgtagctacaccaggccgcttggttgatatgattgagaggggc
aaggtttctcttcgtatggtcaggtatttggctttagatgaagcagatagaatgctggat
atgggattcgagcctcaaattcgcaagattgtccagcagatggatatgcctccaccaggt
tccaggcagacgatgcttttcagtgccacatttccgactgagatacagaggctggcgtct
gatttcctcaaaaattacattttcctgactgttggaaaagttggttcaagcacggatctg
attgaacaaaaagttgagtttgttgcagattataacaagagacagcatctcaaggacctt
cttatgtcccaaaagatgaatggaactaatggaaagcaagctttgaccattgtatttgtt
gaaacgaagaggggagtagatgatctagagtactggttgtcttctaatggctttccagca
acagcaatccatggtgacaaagttcaatgggaaagagaaagagctctgaaatctttcaag
agtggagccactccaatcattgtcgcaactgacgttgcagcacgaggcttggacatccct
tgcgtggctcatgtcatcaactttgatctgcctcgagatatcgatgactatgttcatcgc
ataggtcgtacaggacgtgctggtaactcaggccttgcaactgctttcttcaatgacaag
aacctcggaatttccaaggcactcattgagatcatggaagacagccatcaagaagttcct
tcatggcttgcagaatatgctggctcatcctcatatcatgaaaacgggggtggcagcagt
ggtgctcgccgttctcgaggtggcaagtttggtggccgtgattaccgaagtttcaatcaa
gcttcaaatggttattcgggttattcggactactccaatacttattcggctcaagtacca
agtgctgaaccttttatcgacacttctgctgctgattcttgtaataccccggaatatcgt
ctgactcatggttatgagtctattgtggccagtggctgggagtga

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (54)   

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