KEGG   Bartonella vinsonii subsp. berkhoffii: BVwin_13400
Entry
BVwin_13400       CDS       T02470                                 
Symbol
ruvB
Name
(GenBank) holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
bvn  Bartonella vinsonii subsp. berkhoffii
Pathway
bvn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bvn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BVwin_13400 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bvn03400]
    BVwin_13400 (ruvB)
Enzymes [BR:bvn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BVwin_13400 (ruvB)
DNA repair and recombination proteins [BR:bvn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BVwin_13400 (ruvB)
    RecFOR pathway proteins
     BVwin_13400 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_3 Rad17 AAA_14 AAA_22 AAA_16 DUF815 nSTAND3 AAA_18 AAA_2 RNA_helicase AAA_17 TsaE AAA_28 Sigma54_activ_2 AAA_33 NB-ARC AAA_24 AAA_7 Cytidylate_kin ABC_tran IstB_IS21
Other DBs
NCBI-ProteinID: AGF76415
Position
complement(1598644..1599735)
AA seq 363 aa
MHKDEDQRLLGAMPLPNDPDRSLRPQVLDDFIGQEAARANLKIFIEAAKARQEALDHVLF
VGPPGLGKTTLSQIMAKELGVNFRSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLSP
AIEEILYPAMEDYQLDLIIGEGPAARSVKIDLAKFTLVAATTRLGLLTTPLRDRFGIPIR
LNFYTIEELEYIVQRNARLFSVQISNDGAHEIARRARGTPRIAGRLLRRVCDFALVKRAE
KIDRKVADEALSRLEVDHLGLDPLDRRYLLLIAETFLGGPVGIETIAAALSEPRDAIEDI
IEPYLLQQGFIQRTARGRILTEQAWSHLGLCAPASTTATQKRTLLDIQDTSSLQKTLWDE
EDD
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgcataaagatgaagatcaacgccttttgggtgccatgcctctccctaacgatccagat
cgttctttaagaccacaagtgcttgatgactttattggtcaagaagcggcacgggcaaat
ttgaaaatatttattgaagcagcaaaagcacgccaagaagcgctcgaccatgttttgttt
gttggtccccctggattgggaaaaacaacgctttcacagattatggcgaaagaattaggg
gtgaattttcgctctacttcaggaccagttattgctaaagcaggggacttggctgccctg
ttgaccaatctagaagaacgggatgttctttttattgatgaaattcaccgtttaagtccg
gcaattgaagaaattctttatccagctatggaagattatcagctggatcttataattggt
gaaggtcccgcagcccgttccgtaaaaattgatcttgctaaatttaccttggtggctgca
accacgcgtttgggcttgttaaccaccccattacgagaccgctttggcattccaatccgt
ctcaatttttataccatagaggaattagaatatatcgttcaacgcaatgcgcggcttttt
tcggtccagataagtaatgatggcgcccatgaaattgcacgccgtgcacgtggtacgcca
cgcattgcggggaggttattacgacgggtttgtgattttgctctggtcaaaagagcagag
aaaattgaccgtaaagttgccgatgaagccctttcgcgtcttgaagttgatcaccttggg
cttgatccccttgatcgtcgctatttgctcctcattgcggaaacttttttaggaggcccc
gtggggattgaaacaattgctgctgctctttcagaaccgcgcgatgccattgaagatatt
attgaaccctatcttcttcaacagggctttattcagcgcacagctcgtgggcgaattctt
acagaacaagcttggagccatttaggactttgtgctccagcttccacaactgcaacacaa
aaacgcactttgctcgatatacaagacacttcatctctccaaaaaactttatgggatgaa
gaagatgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (28)   
   Pfam (28)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system