KEGG   Bacillus xiamenensis: BK049_00230
Entry
BK049_00230       CDS       T04852                                 
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
bxi  Bacillus xiamenensis
Brite
KEGG Orthology (KO) [BR:bxi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bxi03016]
    BK049_00230
Enzymes [BR:bxi01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     BK049_00230
Transfer RNA biogenesis [BR:bxi03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    BK049_00230
 Prokaryotic type
    BK049_00230
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB_C PseudoU_synth_2
Other DBs
NCBI-ProteinID: AOZ87236
Position
complement(54585..55514)
AA seq 309 aa
MINGVLLLHKERGMTSHDCVFKVRKILHTKKVGHTGTLDPEVSGVLPICIGRATKIVEYL
TDKSKTYDAEITIGFSTTTEDQTGEIVEEKKVPEPMSEDDIDAVLKQFEGTIEQIPPMFS
AVKIGGKKLYEYAREGIEIERPSRKITVHRIERTTPVTFEDGQVSFRFTVLCSKGTYVRT
LAVDIGKKLGFPAHMSHLIRTGSGDFTLEECITLDELREISEEGTVDEHLVPIERALNHL
PKWEINDTLASKVENGAVLPMPDEFAHFAEEDRVAVFAPSGRCMAIYMKHPTKQNLMKPA
KILSQDKQS
NT seq 930 nt   +upstreamnt  +downstreamnt
atgataaacggtgttcttttattacataaagaaagaggcatgacctctcacgactgtgtg
tttaaagtgagaaagatattacacacaaaaaaagtcggacatacaggaaccctcgatcca
gaggtgtccggtgttttgcctatttgtattggacgagcgacgaaaattgtagagtactta
acagataaatcaaaaacgtatgatgcggaaatcacgattggtttttctacgacgacagaa
gatcaaacaggtgaaatagttgaagaaaaaaaggtgcctgaaccaatgtcagaagatgat
attgatgctgtgctgaagcagtttgaaggaaccattgaacagattccgccaatgttttcg
gctgtaaaaattggcgggaagaagctctatgaatatgcaagagaaggaattgaaattgag
cgtccaagccgcaaaatcaccgttcatcgtattgagcggacaacacctgtcacatttgaa
gatggccaggtatcattcagattcactgttttgtgttcaaaaggcacgtatgtcagaact
ttagccgttgatatcggaaagaaactgggattcccggcccacatgtcacatctcattcgt
acagggtcaggcgactttacgttagaggaatgtatcacccttgacgagctgcgcgagatc
agcgaggaaggaacggtagatgagcaccttgtgccgatcgagcgtgcgctcaatcatttg
ccgaaatgggagataaatgatacattagcaagtaaagtggaaaacggtgcagtcctgcct
atgcctgatgaattcgctcattttgcagaggaagatcgtgtcgctgtctttgctccttca
ggtcgttgtatggcgatttatatgaagcatccgaccaaacagaacctgatgaagccggcg
aagattttatcccaggacaagcaatcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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