KEGG   Burkholderia sp. YI23: BYI23_A009140
Entry
BYI23_A009140     CDS       T01711                                 
Name
(GenBank) excinuclease ABC, B subunit
  KO
K03702  excinuclease ABC subunit B
Organism
byi  Burkholderia sp. YI23
Pathway
byi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:byi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BYI23_A009140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:byi03400]
    BYI23_A009140
DNA repair and recombination proteins [BR:byi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BYI23_A009140
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BYI23_A009140
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR AAA_30 AAA_16 UB2H UvrD-helicase Kinesin AAA_22
Other DBs
NCBI-ProteinID: AET88752
Position
1:1044074..1046170
AA seq 698 aa
MSDTLIESPEELDESKFVTFEGSPFQLYQPYPPAGDQPEAIAKLCEGVEDGLSFQTLLGV
TGSGKTFTMANVIARMGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPEA
YVPQRDLFIEKDSSINEHIEQMRLSATKSLLERRDVVIVATVSAIYGIGNPSEYHRMILT
LRTGDKLGQRDVIARLIAMQYTRNEADFQRGSFRVRGDTIDIFPAEHAEMAVRVELFDDE
VESMMLFDPLTGRVRNKIPRFTVYPSSHYVTPRDTVMRAIETIKLELRERLEFFHGDGKL
VEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGAAPGEPPPTLVDYLPPDALMLLDES
HVLIGQLNGMYNGDRARKENLVDYGFRMPSALDNRPLKFNEFERKMRQAIFVSATPADYE
KTKAGQVAEQLVRPTGLVDPEIEVRPARSQVDDVLGEINARVAARERVLVTVLTKRMAEQ
LTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAIL
DADKEGFLRAERSLIQTIGRAARNVNGKAILYADNMTDSMKRAIGETERRRAKQIAHNEK
MGITPRGVEKRIKDIIDGVYNADDARAELKEAQTRAKFEDMSEKQIAKEIKRLEKQMMDH
AKNLEFEKAAQTRDQLALLRQRVFGANVGDHVSGIGGK
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgtccgataccctcatcgaatctcccgaagaactggacgaatcgaaattcgtcacgttc
gaaggttcgccgttccagctttatcagccgtatccgcccgcgggcgatcagcccgaagcc
atcgcgaagctctgcgaaggcgtcgaggacggcctgtcgttccagacgctgctcggcgtg
acgggctccggcaagacgttcacgatggccaacgtgattgcgcgcatgggccgtccggcc
atcgtcttcgcgccgaacaagacgcttgccgcgcagctctacgccgagttccgcgagttc
tttccgcgcaacgcggtcgagtacttcgtctcgtactacgactattaccagccggaagcg
tatgttccgcagcgcgatctgttcatcgagaaggactcgtcgatcaacgagcatatcgag
cagatgcgtctttcggccacgaaaagcctgctcgagcggcgcgatgtcgtgattgtcgcg
accgtgtccgcgatctacggtatcggcaatccgtcggaatatcaccggatgattctcacg
ctgcgcacgggcgacaagctcggccagcgcgatgtcatcgcgcgcctgatcgcgatgcag
tacacgcgcaacgaagccgatttccagcgcggctcgttccgcgtgcgcggcgacacgatc
gatatcttcccggcggaacatgccgaaatggcagtgcgcgtcgagcttttcgacgacgaa
gtcgaatcgatgatgctcttcgatccgctcaccggccgcgtgcgcaacaagattccgcgc
ttcaccgtgtacccgtcgtcgcattacgtaacgccgcgcgataccgtgatgcgcgcgatc
gaaaccatcaagctcgaattgcgcgagcggctcgaattctttcatggcgacggcaagctc
gtcgaggcgcagcggctggagcagcgcacgcgcttcgatctggaaatgctgcaggaactc
ggcttctgcaagggcatcgagaactattcgcggcatttctcgggcgcggcgcccggcgag
ccgccgccgacgctagtcgactatctgccgcccgacgcgctcatgctgctcgacgaatcg
cacgtgctgatcggccagttgaacggcatgtacaacggcgaccgcgcgcgcaaggaaaat
ctcgtcgattacggttttcgcatgccgtccgcgctcgacaatcgcccgctcaagttcaac
gagttcgagcgcaagatgcgtcaggcgatcttcgtctctgcgacgcctgccgactacgag
aaaacgaaggcggggcaggtggccgagcagctcgtgcgtccgaccggcctcgtcgatccg
gaaatcgaagtgcgccccgcgcgttcgcaggtggacgacgtgctcggcgaaatcaatgcg
cgcgtcgcggcgcgcgagcgcgtgctcgtcaccgtgctgaccaagcgcatggccgagcag
ctcaccgagtttctcgccgatcacggcgtgaaggtgcgctatctgcacagcgacatcgac
acggtcgaacgtgtcgagatcattcgcgacctgcggctcggcacgttcgacgtgctcgtc
ggcatcaacttgctgcgcgaagggctggatattcccgaggtgtcgctcgtcgcgattctc
gacgccgacaaggaaggcttcctgcgcgccgagcgttcgctgatccagaccatcggccgg
gcggcgcgcaacgtgaacggcaaggcgatcctgtacgccgacaacatgaccgactcgatg
aagcgcgccatcggcgaaaccgagcggcggcgcgccaagcagatcgcgcacaacgagaaa
atggggatcacgccgcgcggcgtcgagaagcgcatcaaggacatcatcgatggcgtctac
aacgccgacgatgctcgcgccgagctgaaggaagcgcagacgcgcgcgaagttcgaggac
atgtccgagaagcagatcgccaaggaaatcaagcggctcgaaaagcagatgatggaccac
gccaagaatctcgaattcgaaaaggcggcccagacccgcgaccaattggcgctcctgcga
caacgcgtgttcggggcgaacgtgggcgatcacgtgagcggaatcggcggaaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (19)   

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