KEGG   Coraliomargarita akajimensis: Caka_2482
Entry
Caka_2482         CDS       T01204                                 
Name
(GenBank) RNA methyltransferase, TrmA family
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
caa  Coraliomargarita akajimensis
Brite
KEGG Orthology (KO) [BR:caa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:caa03009]
    Caka_2482
Enzymes [BR:caa01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     Caka_2482
Ribosome biogenesis [BR:caa03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Caka_2482
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Methyltransf_15 Methyltransf_25 Methyltransf_31 Methyltransf_11 PrmA MTS TPMT
Other DBs
NCBI-ProteinID: ADE55498
UniProt: D5ENM2
Position
3019925..3021154
AA seq 409 aa
MDKQVPKNFVAEPFEYHQELELTVDSLTNLGMGVCRDGNGWVVMVPFVIPGERVRVRVYR
NYSNYSDADLLEVLEPSADRVTPQCPLYQTCGGCQYQHVDYERQLAEKTGHVKELMEKIG
ELDHPIEGAIGSPEVYYYRSKITPHYQRQNKDGSQPIGFLQFGRRNQIVDVEQCPIATRE
INEALPEAREEARLSGGKKRRQRGGTLLLRHVLEGVVTDPKAVVSERVRDVTFQFKAGEF
FQNNPFILPKMVDYVEAEASADGARYLVDAYCGSGLFALSTAKSFEQVAGVEVSDQAVLW
AQANCRISGISNARFLIGKAEAIFNGLKFPADETALIIDPPRKGCDESFRLQLLQFRPQR
LVYVSCDPATQARDVKAFVDGGYRVTRIQPFDLFPHTRHIENVVSLSLA
NT seq 1230 nt   +upstreamnt  +downstreamnt
atggacaagcaagtgccaaaaaatttcgtcgcggagccttttgaatatcatcaggagtta
gagctgactgtcgacagccttaccaacttgggtatgggggtttgtcgcgatggcaatggc
tgggttgtcatggtgccctttgtgattccgggggagcgcgtgcgggtccgggtttatcgg
aattacagcaactactcggatgcggatctgctcgaggtgctggagccgtcagccgaccga
gtgacgccgcagtgtccgctttatcagacatgcggtggttgccagtatcagcatgtcgac
tatgagcgccagttggctgagaagactgggcatgtgaaggagttgatggagaaaattggc
gagttggatcatcccatcgaaggtgcgattggttcaccggaggtgtactattatcgttct
aaaatcacaccccattatcaacgacagaataaggatggtagtcagccgatcggttttctg
cagttcggccgccggaatcagattgtggatgtggaacagtgtccgattgcgaccagagag
attaatgaggcgctgcccgaggcgcgggaagaggcgcgtctgtcggggggtaaaaagcgc
cggcagcgtggtggtacgcttcttttgcgccatgtccttgagggcgtggttacggatccc
aaggcagtggtctcagagcgtgttcgcgatgtgacgtttcagttcaaagcgggagaattt
tttcagaacaacccctttattttgccaaagatggtcgactacgttgaggctgaagcctca
gctgacggtgcgcgctatctggtcgatgcctattgtggttcggggctctttgccctgtct
actgcgaagtcctttgagcaagtcgccggggttgaggtgagtgatcaggccgtgctctgg
gctcaggctaattgtcgtatcagtggtatcagcaacgcacgcttcttaatcgggaaggcg
gaagctatatttaacgggttgaagtttcctgcagatgaaaccgcgttgattatcgatccg
ccgcggaagggctgtgatgagagctttcgcctgcagttgctccaattccgcccgcagcga
ctggtctatgtttcctgtgatcccgcgactcaggctcgcgatgtgaaggcgtttgttgac
ggtggctatcgcgtgacgcgcatccagccctttgatttgtttccgcatacgcgtcatatc
gagaatgtggtgtcgttgagtctggcctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (173)   
   KEGG ORTHOLOGY (1)   
   RefGene (170)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (188)   

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