KEGG   Caldithrix abyssi: Cabys_2828
Entry
Cabys_2828        CDS       T04549                                 
Name
(GenBank) cas1 CRISPR-associated protein, Cas1 family
  KO
K15342  CRISP-associated protein Cas1
Organism
caby  Caldithrix abyssi
Brite
KEGG Orthology (KO) [BR:caby00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:caby03400]
    Cabys_2828
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:caby02048]
    Cabys_2828
DNA repair and recombination proteins [BR:caby03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     Cabys_2828
Prokaryotic defense system [BR:caby02048]
 CRISPR-Cas system
  Universal Cas proteins
   Cabys_2828
SSDB
Motif
Pfam: Cas_Cas1
Other DBs
NCBI-ProteinID: APF19576
UniProt: H1XX16
Position
complement(3376676..3377758)
AA seq 360 aa
MSTVYVAADRARLTKSGQTLVLKYEDNTQRVIFPFRTDQLVLIGNIDITTPALKLLMHHQ
IDTVFLNKNGKFNGKITFNRGKNIFLRLRQFRLLDDEKFSLQMARAIAGGKIRNQLVFAQ
RIRRERKAAEVTQAIGQMNDLLKKVQEADSKERLRGLEGSAARLYFSIYKYAFLVDWADF
PGRSMNPPKSNVNAVLSFLYTLIKNRVEAALETEGLDPYASFFHALNYGKVGLAFDMMEE
FRVPLSDMLTASLFNLGILDEDDFREVNFRSDDDEFPLEMEIVKEGDEPQILPRSSVGIL
LTKKGLTRVITHFEKRLETEIMHPWAERRMSYKQIIRYQARHLRRVISGEEQYYQPFGIR
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgtccaccgtgtatgtagcggccgatcgggcgcggttgaccaaaagcgggcaaaccctg
gtgttgaagtacgaggacaacacgcaacgggtgattttccctttccgcacggaccaactg
gttttgatcggcaatatcgacattactaccccggccttaaaactgttgatgcaccatcag
atagatacggtgtttttgaacaagaacggcaaattcaacggaaagattacctttaaccgg
ggtaagaatatctttttaagattgcgtcagttccgtttgctggacgacgagaaatttagc
ttgcagatggcgcgggccattgccgggggcaagattcgcaatcaactggtttttgcccag
cgcatccgtcgcgagcgcaaggcggcggaggttactcaggctatcggtcagatgaacgat
ctgctaaaaaaagttcaggaagcggatagtaaagaacgtttgcgcggattggagggtagc
gcggcccggctctatttttctatttacaaatacgcttttttggttgactgggccgatttt
cccggtcgttccatgaatccgccaaaaagcaatgtgaatgcggtattgagctttttgtac
acgctgatcaaaaaccgcgtggaagcggcgcttgaaacggaggggctggatccttacgcc
agtttttttcacgcgctcaattacggcaaagtggggcttgctttcgacatgatggaagag
tttcgcgtaccgttgtcggacatgttaaccgcgtcgctttttaacctggggattctggac
gaggatgattttcgggaggtgaatttccggagcgacgacgacgagtttccgctggagatg
gagatcgtaaaagagggcgacgagccgcagattttgccgcgcagtagcgtgggaattttg
ctgaccaaaaaaggattgaccagggtgattacgcattttgagaagcgtctggaaacagag
atcatgcatccctgggccgagcggcggatgagttacaagcagatcattcgatatcaggcg
cgtcatttacggcgcgtgattagcggggaagagcagtattaccaaccatttggcatacga
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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