KEGG   Caldithrix abyssi: Cabys_3751
Entry
Cabys_3751        CDS       T04549                                 
Name
(GenBank) ATP-dependent helicase/DNAse subunit B
Organism
caby  Caldithrix abyssi
SSDB
Motif
Pfam: PDDEXK_1 ADDB_N UvrD_C QLQ
Other DBs
NCBI-ProteinID: APF20496
UniProt: H1XNY8
Position
complement(4447752..4451024)
AA seq 1090 aa
MNHIYVTCRAPGSYFAFQDQISEHLEQNHLTALVIVPVNRAVRRLKRTLTNLAGKRALID
PPVFTFDRLLLHIYQHLPHPARLLPADTMLVLIQEILEQQAEAFQYLTRGQQVKGGLVNR
VWEMTGELRSFGFTSTELAGKDPQELEVHPEKFTDFVRLLEKIEEKLGAEFIDEPFARTT
AARQVTRQQFEKLFPQVKALYISGYGLFSPPMIDFIKRVGQWLPVHVQLDFLQANQELFR
HTLQALEKFKLIGARIEHKSTPSFLARFLFNRKDRPQKHDLSQRIHVVGLSSREREVAFI
AGKIRQLNAQGVPLHKIAVTFSHLEKYAQTIRQVFEDFGIPFNLSTGFELIRSPLISAFL
DVLTIIEEDFPAEQTLAFLQNQFVQKPEEIDFDLLKSIIVKARVRALNERSLEALKRFIP
LQARADEENGWNQEKALEQVELLKTLLQPLFAFPREAAADAFRKKYLELCERLGLLRWYE
AENPRLTERQKEHNFRAYNRFVKVFERSLWTLSLIYGKTSFKSRQLMESLQRAVLTATYN
LTEWPDYGVQIMPRLEILSVDFEALFLGGLVDGDFPRASVKDIFFNDRVRYELGLVASEE
LLDQDRFLFYQLLDGGASQVYLTYPQYQQEEALVPSSFLADLQDVALVDWQQPADDDPLF
ENEQKLWKEFGLNLQWIANPELRQGAIENLRLLRALQPQNETLLKNLIDQIRISLARSMG
GAFSEYEGNLSLFTVVTDALRQKYARHTWSVSRLETYARCPMQFFLRYVLKIEAPAGMEE
ELTPLERGQLLHTILFRFYSELKEIGQQDQPWRFADRLLAIALEEFAALPYSGLFWEMEK
LRFSGNERLKGILPAFLEKEEERAASMPFLPQNFELSFGYSGDFPADPQSIKEAVLLKSG
DQTLRLQGRIDRVDLDEHGHAAIIDYKTGSVGSGLINEINEGRLLQIPLYLAALPQILPK
CTPVYGGLYSLKSSDEVQLKAAVADRNCPSLHDSSTRAFLPNKNLVDENDGHQLTFNEML
NRSVAFALAYIGQIQNGVFHHTLNPGDRFCESYCEYRRMCQKVRGKLERIAALQKEKPEA
VQQNNGGESE
NT seq 3273 nt   +upstreamnt  +downstreamnt
atgaatcatatttacgttacctgcagggcgccgggctcttattttgcttttcaggatcaa
atcagcgaacaccttgagcagaatcatttaacggcgctggtaattgtgccggtaaaccgc
gccgtgcgtcgtttaaagcgcaccctgaccaacctggccggcaaacgcgctttgattgat
ccgccggtgtttacttttgaccggctattgctgcacatttaccagcatttgccccatccg
gcgagattgctgcccgccgacaccatgctggtgttgatccaggaaattcttgaacagcag
gcggaagcgtttcaatatttaacgcgcgggcagcaggtgaagggcggtttggttaaccgc
gtttgggaaatgaccggagagctgcgcagttttggctttacttctaccgagctggccggc
aaagacccgcaggagctggaagtgcatcccgaaaaatttaccgactttgtgcggttactg
gagaagatcgaagaaaagttgggcgcggaatttattgacgaaccctttgccaggaccacg
gccgcgcgccaggttacgcgccagcagttcgaaaaattgtttccgcaggttaaggcgctt
tacattagcggttacggtttgttcagtccgcccatgatcgattttatcaaacgcgtgggg
cagtggctgccagtgcatgtgcagctggactttttgcaggccaatcaagaactgtttcgg
cacacgctccaggcgctggaaaaatttaagctgatcggcgcccggatcgaacacaaatcg
acgccttcctttctggcgcgttttctgttcaatcgcaaggatcgcccccaaaagcacgat
ctcagccagcgcattcatgtggtggggttgagcagtcgagaacgagaagtggcttttatt
gcgggaaaaataagacagttaaatgcgcagggcgttccgttgcacaaaatagctgtcacc
ttcagccatctggaaaagtacgcgcaaaccatccgccaggtatttgaagatttcggcatt
ccgtttaatctttccaccggctttgaactgatccgctcgccgttgatctccgctttttta
gatgtgttgaccatcatcgaagaggatttcccggcggagcagaccctggcctttttacaa
aatcaatttgtgcaaaagcctgaagaaatcgattttgatctgttgaaaagcatcatcgtt
aaggcgcgtgtccgcgccctgaacgaaagaagtcttgaagccttaaaacgctttatcccg
ctgcaggcccgggcagatgaagaaaacggctggaaccaggaaaaggcgctggagcaggtt
gagctattaaaaacgcttttgcagccgctgtttgcctttccgcgcgaggcggcggccgac
gcgttccgtaaaaaatacctggaactttgcgaacgtctgggcttattgaggtggtacgaa
gcagagaatccccgccttacggagcgccagaaggagcacaactttcgggcttacaaccgc
tttgtcaaggtttttgaacgcagcttgtggacgctttctttgatttacggcaagacgtct
tttaaaagcaggcagttgatggaaagcctgcaacgcgccgtgttaaccgctacctacaac
cttactgaatggcccgattatggcgtacaaatcatgccccgtctggaaattttgtccgtc
gatttcgaggcgctttttttgggcggactggtggacggcgattttccgcgcgcttcggtt
aaagatatcttttttaacgatcgcgtgcgatacgagctggggctggtggccagcgaagaa
ttgctggatcaggaccgtttcttgttctaccagttgctggatggcggcgccagtcaggtt
tatttgacctatccgcaataccagcaggaagaggcgctggtgccttcttcttttctggcc
gatctgcaggatgtggcgctggtcgattggcaacagcccgccgacgatgatccgcttttt
gaaaacgaacaaaaattgtggaaggaatttggtcttaacctgcagtggatcgctaatccg
gagctgcggcagggggcaatagaaaatttgcgtttgttgcgcgccctgcagccgcaaaac
gaaacgcttttaaaaaatttaatcgatcaaattcgcatcagtctggcgcgttccatgggc
ggcgctttttcagaatatgaaggcaacttgtccctctttaccgtagtgaccgacgcgtta
aggcaaaaatacgcgcgccacacctggtcggtcagtcgcctggaaacttacgcccgctgc
cccatgcagttctttttacgctatgttttaaagatcgaagcgccggccggaatggaagaa
gagctaaccccgctggaacgcggtcagctattgcacacgattttgttccgcttttactcg
gagcttaaagaaatcggccagcaggatcagccctggcgttttgccgatcgtttattggcc
attgctctggaggaatttgccgccctgccttacagcggtctgttctgggagatggaaaaa
ctgcgtttttcaggcaacgagcggctgaaaggcattttgccggctttcctggaaaaagag
gaagaacgcgccgcttccatgccctttttaccgcagaactttgaactgtcttttggttac
agcggcgattttccggcggacccgcagtcgatcaaagaggctgtgcttttgaaaagcgga
gatcaaacgctgcgtttgcagggccgaatcgatcgcgttgacctggatgagcatggtcat
gcggcgatcatcgattacaaaacaggttcggtgggcagcggcctgatcaacgaaattaat
gaggggcgccttttgcaaattcccctttacctggcggcgctcccgcaaattttgccgaag
tgcaccccggtttacggcggactttactctttaaaatcgagcgatgaagtgcaattgaaa
gcggcagtggccgaccgcaactgcccatctctgcatgattccagcactcgggcctttttg
cccaacaaaaacctggtagatgaaaacgacgggcatcaattgacatttaacgagatgctc
aatcgttccgttgcattcgctctggcttacattgggcagattcaaaacggcgtgtttcat
cacacccttaatcccggcgaccgcttttgcgagagctattgtgaatatcggcgtatgtgt
caaaaggtgagaggaaaactggaacgcattgccgctttgcaaaaagaaaagccagaggcc
gtccagcagaataatggcggagaaagcgaatga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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