KEGG   Candidatus Cloacimonas acidaminovorans: CLOAM1877
Entry
CLOAM1877         CDS       T04769                                 
Name
(GenBank) putative formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
caci  Candidatus Cloacimonas acidaminovorans
Pathway
caci03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:caci00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CLOAM1877
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:caci03400]
    CLOAM1877
Enzymes [BR:caci01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     CLOAM1877
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CLOAM1877
DNA repair and recombination proteins [BR:caci03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CLOAM1877
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco NFACT_N zf-FPG_IleRS Ribosomal_S13
Other DBs
NCBI-ProteinID: CAO81704
UniProt: B0VJL9
Position
complement(2210749..2211552)
AA seq 267 aa
MPELPEVQSIINDLEKVLKGKTIKTIECYYSGTVITNCLPEDNPFPSRALAIKRRGKYII
IMLERDNALIIHLRMTGKLIYDTFCGEPLKYERARIILENNEVLHFIDIRTFGKIVICSQ
KNIEHCLPPLGLEPFSDDFTPKALKEKMHGKKAPIKIALMDQKIIAGLGNIYVCEILYRA
GINPEKPANKITRKNIVKIIQQTKEVLTEAIDKGGTSISDYRRIDDKPGSFQNFLQVYQK
QFCPLGHKVLRLKQGGRSTFYCPICQK
NT seq 804 nt   +upstreamnt  +downstreamnt
atgccggaattgcctgaagtgcaaagcattatcaacgatttggaaaaagtgctgaaaggt
aaaactataaaaacaattgaatgttactattccggaacggtaattacgaattgtttaccg
gaagataatccctttccaagtagggctttggcaataaaacgccgcgggaaatatattatt
ataatgctggaaagggataatgccttaataattcacttgcggatgacaggtaaactgatt
tatgatactttttgcggtgaacccttaaaatacgaaagagccagaataatcctggaaaat
aatgaagttctgcattttatagatattcgcactttcggaaaaatagttatctgcagtcaa
aaaaacatagagcattgccttccgcctttgggactggaaccctttagtgatgactttacc
cctaaagctttaaaagaaaaaatgcacggcaaaaaagctcccataaagattgctttaatg
gaccagaaaattattgccggattgggaaatatctatgtttgtgaaattctctatcgggct
ggaattaatcctgaaaaaccggcaaataaaattactcggaagaatattgtgaaaattatt
caacagacaaaggaagtccttacggaagcaatagataaagggggaacaagtatttcggat
taccgcagaattgatgataaaccgggcagttttcaaaacttcttgcaggtttaccaaaag
cagttctgtcctttggggcataaggttttacggctgaaacaaggtggacgttctacattc
tactgcccaatatgccaaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (35)   

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