KEGG   Candida albicans: CAALFM_C105050CA
Entry
CAALFM_C105050CA  CDS       T00189                                 
Symbol
RRP6, CaO19.58
Name
(RefSeq) exosome nuclease subunit
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
cal  Candida albicans
Pathway
cal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CAALFM_C105050CA (RRP6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cal03019]
    CAALFM_C105050CA (RRP6)
Messenger RNA biogenesis [BR:cal03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     CAALFM_C105050CA (RRP6)
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC
Other DBs
NCBI-GeneID: 3647535
NCBI-ProteinID: XP_710869
UniProt: A0A1D8PDF4
Position
1:complement(1055313..1057673)
AA seq 786 aa
MSSESEDVFKEIFPKLMNTIRAASSLGAQDVNFYKTVDKDLGQQIDDQSQRLLNISNDLL
RAAIDDPNDFQAIEYGEENVTGEVSWKPVSRIIDSIFDKIDSTFVQAKRKAKGITKDQEL
EYLDNGKTSTTTTISNEKASKIEKPQLKFKVPIDNSESGPFKPKLSSKPHALVPFNDSLI
NPEPVYEDSIEIIDPPFYAQPYEYEIDNQPYPDAILAKSDPIPPKDWSTTKAIWVDTVEE
LQKMVQELKKSTEIAVDLEHHDYRSYYGIVCLMQISNREQDWIIDTLALRDDLTVLNEVF
ADPDIVKVFHGAFMDIIWLQRDLGLYVVSLFDTFHASRALGFPRFSLAYLLEVYAHFKTS
KQYQLADWRIRPLSPPMLAYARSDTHFLLFIYDQLKNKLIDAEKLSQVLYDSRQVAKRRF
EYTKYRPMANTFSNKVTCPVMAFNPKEPWGSIVSQYNVPHFKRPVVEVLYKWRDLMAKKQ
DESVRYIMPNQLLVSLANLESPVDLNKVLNVSYRISDAVRINAKELANLIEKTLKETEAN
DWDLVDQWNKQQSEEQDDNSIDAASVANEFDRLLTNTTQVFETSTLLTKESKAFGNIYHN
KALFTLEFRDEKVFKHNFNDVSKKRFEATWKELTAATDLAITIPISDIEDIDEAEEEEDE
QSEEDASESTPQASDEAPKISGQAALFNNDKEINPNELITLRKRNVRPNKKNNNNNKKVP
QEDQKEIDYANADKILLKDIKKKNDRKRRGFDPYSRDSEGPKPAKRAKAMTSGRTSTYKK
KMNKYK
NT seq 2361 nt   +upstreamnt  +downstreamnt
atgtcatcagaaagtgaagatgttttcaaggaaatattcccgaaattaatgaacaccatt
agagctgctagttcattgggagcacaggatgtcaatttctataaaacagtggacaaggat
ttaggtcaacaaattgatgaccaaagtcaaagattgttgaatataagtaatgatttactt
agagcagccattgatgaccctaatgattttcaagctattgaatatggtgaagaaaacgtg
acgggtgaagtatcttggaaacctgtatcacgaataatcgattcaatttttgataagatt
gattctacttttgttcaagcaaaacggaaagcaaaagggatcaccaaagatcaagaatta
gaataccttgataatggtaaaacttctaccacaacaacaataagtaatgaaaaggcatcg
aaaatagaaaaaccacaattaaaatttaaagtccctattgataattcagaatcaggacct
ttcaaaccaaaactttcatccaaacctcatgcattagtaccattcaatgattctttgatt
aatccagaaccggtttatgaggactcaattgagattattgatcctccattttatgcccaa
ccttatgaatatgaaattgataatcaaccttatcctgatgccatactagctaaatctgat
cctattccaccaaaagattggtctaccaccaaggccatatgggtagacaccgtggaagag
ttacaaaaaatggtacaagaattgaaaaaactgactgaaattgcggttgatttggaacat
cacgattatcgatcatattatggtattgtatgtttaatgcaaatttccaatcgtgaacaa
gattggattattgatactcttgccttacgtgatgacttgaccgtattgaatgaagtattt
gccgaccctgatattgttaaagtattccatggagcatttatggatataatatggttacaa
agagatttggggttatatgttgtttcattatttgacacttttcatgcttcaagagcactt
ggatttccaagattctccttggcatatttattagaagtgtatgctcatttcaaaacatct
aaacaatatcaattagcagattggagaattagacctttatcaccaccaatgttggcatat
gcaagatcagatacccattttttgttattcatatatgatcaattgaaaaataaattgatt
gacgcagagaaattatctcaagtattgtatgactcacgacaagttgctaagagaaggttt
gaatacacgaaatatagacctatggctaatacattttccaacaaagttacatgtccagta
atggcattcaatccaaaggaaccatggggatctattgtatcacaatacaatgttcctcat
ttcaagcgtccagtggttgaagttttgtataaatggagagatttgatggctaaaaaacaa
gatgaatccgtgaggtatatcatgcctaatcaattgcttgttagtttagctaacttggaa
tcaccagtggatttgaataaagtgctcaatgtttcttatcgtatttctgatgcagttaga
atcaatgcgaaagaattagcaaacttgattgaaaaaaccttaaaagaaactgaagctaat
gattgggacttggttgatcaatggaacaaacaacaaagtgaagaacaagatgacaactcc
attgacgctgcaagtgtagctaatgagtttgatagattgcttacaaatactacccaagtg
tttgaaacatctacattgttgactaaagaatccaaggcatttgggaatatatatcacaac
aaagcattgttcactttggaatttagagatgaaaaagtttttaagcataattttaatgat
gtgtcaaagaagagatttgaagctacatggaaagaattgacagctgccactgatttggct
atcactatccctataagtgatatcgaagatatagacgaagcagaggaggaagaagatgaa
caatctgaagaagacgcttctgaaagtactccacaggcttctgacgaagctcctaaaatt
tcaggacaagctgctttgttcaataatgataaggagattaatccaaatgaacttataacc
cttcgaaaacggaacgttcgaccaaataaaaagaataataacaacaacaaaaaggttcca
caagaagatcaaaaggagattgactatgctaatgctgacaagatattattgaaagatata
aaaaagaaaaatgatagaaagagacgtggatttgacccgtatagtagagatagtgaaggt
ccaaaacctgctaaaagggccaaggccatgacatctggaagaacttccacgtataagaag
aaaatgaataaatataaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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