KEGG   Cicer arietinum (chickpea): 101501650
Entry
101501650         CDS       T02819                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
cam  Cicer arietinum (chickpea)
Pathway
cam03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cam00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101501650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cam03019]
    101501650
Messenger RNA biogenesis [BR:cam03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     101501650
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     101501650
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 101501650
NCBI-ProteinID: XP_004510523
UniProt: A0A1S2YVC7
Position
Ca7:33246010..33250183
AA seq 128 aa
MSWAGPEDIYLSTSLASYLDKKLLILLRDGRKLMGTLRSFDQFANAVLEGACERVVVGDL
YCDIPLGLYVIRGENVVLIGELDMEREELPPHMTRVPTEEILRAQKAERDASDLKGTMRK
RMEFLDMD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcaggtcctgaagatatctatctttctacttcacttgctagttatcttgac
aagaaacttcttatattgctaagagatggtagaaagctcatggggacacttcgctctttt
gatcaatttgctaatgctgttcttgagggtgcctgtgagagggttgttgttggtgatctg
tattgcgacatccctctgggtctttatgtaatccgtggggagaatgttgttctaattggt
gagctggacatggagagggaggaacttcccccacatatgactcgtgttcctacagaagaa
atcttgagggcacagaaagcagaaagggatgcttcagatctgaaaggaactatgagaaaa
agaatggaattccttgacatggactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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