KEGG   Citrobacter amalonaticus Y19: F384_05080
Entry
F384_05080        CDS       T03934                                 
Symbol
putA
Name
(GenBank) transcriptional regulator
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
cama  Citrobacter amalonaticus Y19
Pathway
cama00250  Alanine, aspartate and glutamate metabolism
cama00330  Arginine and proline metabolism
cama01100  Metabolic pathways
cama01110  Biosynthesis of secondary metabolites
Module
cama_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:cama00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    F384_05080 (putA)
   00330 Arginine and proline metabolism
    F384_05080 (putA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cama03000]
    F384_05080 (putA)
Enzymes [BR:cama01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     F384_05080 (putA)
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     F384_05080 (putA)
Transcription factors [BR:cama03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    F384_05080 (putA)
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PutA_1st PRODH
Other DBs
NCBI-ProteinID: AKE58563
UniProt: A0A0F6RET5
Position
complement(1122396..1126358)
AA seq 1320 aa
MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFNYLEKLENDDALPELPALLAGA
ANESDESTAPQEEIHQPFLEFAEQILPQSVSRSAITAAYRRSETDAVSMLMEQARLPQPV
AEQAHKLAYQLADKLRNQKSASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKAT
RDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGRLVSTHNEASLSRSLNRIIGKSG
EPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAY
MVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLA
RQYDIGINIDAEEADRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPFVIDYLTDL
ATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLI
YPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIY
APVGTHETLLAYLVRRLLENGANTSFVNRIADTTLPLDELVADPVDAVEKLAQQEGQTGL
PHPKIPLPRDLYGKGRDNSAGLDLSNEHRLASLSSALLNSALQKWRALPMLDVAVAEGEM
SPVVNPAEPKDIVGYVREATEAEVEQALQSAVNNAPIWFATPPQERAAILHRAAVLMEGQ
MQQLIGILVREAGKSFANAIAEVREAVDFLHYYAGQVRDDFDNETHRPLGPVVCISPWNF
PLAIFSGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGRGETVGA
KLTSDSRVRGVMFTGSTEVATLLQRNIATRLDAQGRPIPLIAETGGMNAMIVDSSALTEQ
VVVDVLSSAFDSAGQRCSALRVLCLQDDIADHTLKMLRGAMAECRMGNPGRLTTDIGPVI
DSEAKSNIEQHIQAMRAKGRPVFQAARENSEDVREWQSGTFVAPTLIELESVDELQKEVF
GPVLHVVRYNRNNLDALIAQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVG
AVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPENALSITLARQDADYPVDAQLKAVLS
QPLEALSEWAADNPTLRQLCQQFGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDE
QDALVQLAAVASVGSLILWPDDTFHRELAKRLPAAVSARITFAKTEGLMSQPFDAVIFHG
DSDQLRALCEAVAAREGAIVSVQGFARGESNILLERLYVERSLSVNTAAAGGNASLMTIG
NT seq 3963 nt   +upstreamnt  +downstreamnt
atgggaaccaccacgatgggggttaaactggatgacgcaacgcgcgagcgtattaagtca
gcggcaacgcgtattgatcgcaccccgcactggttgattaagcaggcaatctttaattac
ctggaaaaactggaaaacgatgacgcgctgccagaacttcctgcgctgttagccggagcc
gccaacgaaagcgatgagtccacggcgccgcaggaagagatccatcagcctttcctggaa
tttgccgaacagatcctcccccagtcggtctcacgttccgccatcaccgccgcgtaccgc
cgctcagaaacggacgccgtttcgatgctgatggagcaggcgcgtctgccgcagccggtg
gccgaacaggcccacaaactggcttatcaactggcggataaactgcgtaatcagaaatcg
gccagcggtcgtgccggtatggtgcagggactgttacaggagttctccctctcgtcgcag
gaaggggtggcgctgatgtgcctggcggaagcgctgctgcgtattccggataaagccacg
cgcgatgctttaatccgcgacaaaatcagtaacggcaactggcagtcacacatcggtcgt
agcccgtcgctgttcgtcaatgcggcgacctggggtctgctgtttaccggtcgtctggtc
tccacccataacgaagccagcctttcgcgctccctgaaccgcattatcggtaagagcggt
gagccgctgatccgtaaaggcgtcgacatggcgatgcgcctgatgggcgaacagttcgtc
accggggaaaccattgccgaagcgctggcgaatgcccgcaagctggaagaaaaagggttc
cgttactcctacgatatgctgggcgaagccgcgctgactgctgccgatgcgcaggcctat
atggtctcttatcagcaggcgattcacgcgattggtaaagcatcgaacggacgcggaatc
tatgaagggccggggatctctatcaagctctctgccctgcacccgcgctacagtcgcgcc
cagtacgatcgggtaatggaagagctctatccgcgcctgaagtcgctaacgctgctggcg
cgccagtatgatatcggcatcaatatcgatgccgaagaggccgaccgtctggagatctcc
ctcgatctgctggaaaaactgtgcttcgaacctgaactggccggctggaacggtattggc
ttcgtgattcaggcctaccagaaacgctgcccgttcgtcatcgattacctgacagacctg
gccacccgtagccgccgccgtctgatgatccgtctggtcaaaggcgcctactgggatagc
gagatcaaacgcgcgcagatggacggactggaaggctatccggtttacacgcgcaaggtc
tacaccgacgtctcttatctcgcctgcgcgaagaaactgctcgccgtaccgaatcttatc
tacccgcaatttgcgacccacaacgcccatacgctggcggcgatttatcaactggccgga
cagaactactatccgggtcagtatgaattccagtgtctgcacggaatgggtgaaccgctg
tacgaacaggtcaccggtaaagtggcggatggcaaactgaaccgtccgtgccgcatttat
gcgccggtcggcacccatgaaacgctgctggcgtatctggtgcgtcgtctgctggaaaac
ggggcgaacacctcctttgttaaccgtatcgcggataccacgctgccgctggacgaactg
gtagccgatccggtcgacgccgtcgagaaactggcgcagcaggaaggtcagaccggtctg
ccgcatccgaaaatccctctgccgcgcgatctgtacggcaaaggccgtgataactcggcc
ggtctggatctttccaacgaacatcgtctggcctcgctctcctctgccctgctcaacagc
gcgctgcaaaaatggcgggcgctgccgatgctcgacgtcgcggttgccgaaggtgagatg
agcccggtggtcaacccggcagagccgaaagacatcgttggctatgtccgtgaagctact
gaagccgaagtggaacaggcgctgcaaagtgcagtgaacaacgcccccatctggtttgcg
acgccgccacaagaacgtgccgctatcctccatcgcgcagccgtgttgatggaaggtcag
atgcaacaattgatcggcattctggtacgcgaagccggtaaaagcttcgccaacgctatt
gccgaagtgcgtgaagcggtcgatttcctgcactattacgccggtcaggtccgtgacgat
tttgataatgaaacgcaccgcccgctcggcccggttgtttgtatcagcccgtggaacttc
ccgctggctatcttcagcggacagattgccgcggcgctggccgcaggcaacagcgtactg
gcaaaaccggcggaacagacgccgcttatcgcggcccagggcatcgctatcttgctggaa
gcgggcgtaccgccgggcgtggtgcaactgttgcctggccggggtgaaacggtaggtgcg
aagctgacctctgacagccgcgtgcgcggcgtgatgtttactggctcgaccgaggtggcg
acgctgctgcaacgtaacatcgcaacgcgtctggatgcacaggggcgtccgattccgctg
atcgctgaaacgggcggcatgaacgcgatgatcgttgactcatccgccctcaccgaacag
gtggtggtcgacgtgctgtcttcggcgtttgatagcgccggtcagcgctgttccgccctg
cgcgtgctctgtctgcaggatgatatcgccgaccacacgttgaaaatgctgcgcggcgca
atggccgaatgtcggatgggcaacccagggcgtctgacgaccgatattggtccggtgatc
gacagtgaggccaaatccaatattgagcagcatattcaggccatgcgggcgaagggtcgt
cccgtgttccaggcggcgcgtgaaaacagtgaagatgtccgcgaatggcaaagcggcaca
ttcgttgcgccgacgcttatcgaactggaaagcgttgatgagctgcaaaaagaggtcttc
ggtccggttctgcacgtcgtgcgctacaaccgcaacaacctggacgcgctgatcgcgcag
atcaacgcctccggctacggtctgacgctgggcgttcacacccgtattgatgaaaccatc
gcccaggtcaccggctcggcgcatgttggcaacctgtacgtcaaccgtaatatggtaggg
gcagtcgtcggcgtacaaccgttcggcggcgaagggttgtcgggtaccggtccgaaagcc
ggtgggccgctctatctctaccgtctgctggcaaaccgtccggagaatgcgctgtctatt
accctggcgcgtcaggatgcagactacccggtggacgcccaactcaaagccgtgctgagc
cagccgctggaagcgctcagcgaatgggcagccgacaatccaactctgcgccaactctgc
cagcagtttggcgaactggcacaggccggtacgcagcgtctgctgccgggtcccaccggg
gaacgtaacacctggacgctgttaccgcgtgagcgcgtgctgtgtatcgccgatgatgag
caggatgcgctggtgcaacttgccgccgtcgcctcggtcggtagtctgattttgtggcct
gacgataccttccaccgtgagctggcgaaacgtctgccggccgcagtttccgcgcgtatt
acgtttgcgaaaaccgagggtctgatgtcgcaaccgttcgatgccgttatctttcacggg
gattccgatcagcttcgcgccttgtgtgaagcggttgcagcccgtgaaggcgcgattgtg
tcggtacaaggttttgcccgtggcgaaagcaatattctgctggaacgactgtacgtcgag
cgctcgttgagcgtgaacacggccgccgccggagggaacgcaagcctgatgacaattggc
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (15)   
   KEGG COMPOUND (15)   
Chemical reaction (10)   
   KEGG ENZYME (2)   
   KEGG REACTION (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (43)   

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