KEGG   Cyclobacterium amurskyense: CA2015_1992
Entry
CA2015_1992       CDS       T03993                                 
Name
(GenBank) DNA polymerase III epsilon subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
camu  Cyclobacterium amurskyense
Pathway
camu03030  DNA replication
camu03430  Mismatch repair
camu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:camu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CA2015_1992
   03430 Mismatch repair
    CA2015_1992
   03440 Homologous recombination
    CA2015_1992
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:camu03032]
    CA2015_1992
   03400 DNA repair and recombination proteins [BR:camu03400]
    CA2015_1992
Enzymes [BR:camu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CA2015_1992
DNA replication proteins [BR:camu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CA2015_1992
DNA repair and recombination proteins [BR:camu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CA2015_1992
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 RNase_T tRNA_anti-codon Intimin_C Etd1 GST_C
Other DBs
NCBI-ProteinID: AKP51419
UniProt: A0A0H4PB21
Position
complement(2384684..2388970)
AA seq 1428 aa
MYLIFDTETTGLPRNYNAPMSDLDNWPRLVQLAWQLHDEKGRLVSNNNFIVKPEGFTIPY
NSEKIHGISTQRAIDEGHELSKVLEIFEEDLRKTTYLVGHNIGFDISIVGAELLRTNKSI
KDLEKEPLDTKDISTEFCAIPGGKGGKFKWPTLLELHNKLFGEGFGDAHDAAYDVDATAK
SFFGLIKEGVQPPVEGVELDEIIYEAPNLEAANFAAAKDDVKVTAQKVLKAANRADISDL
KDTLFTHLHVHTQFSILQSTSEIPAAIKRAKELGMPALAMTDHGNMMGAFNFVREAFNND
IKPIIGCEFNLCRDRKNKSNKDDGYQTVLLAKNKAGYHNLAKLSSYANIEGFYYVPRIDR
EVLVQYKGDIIATTGGLWGEIPYLILNVGETQAEEAFVWWLDQFGEDFYIELNRHGIPEE
EKVNEVLLQWAEKYKVKYFAANNTYYNAQEDAKSHDILLCVKDGELVEKPKKYIGKRGRE
YRYGFPNDEFYLKSPEEMKKLFADLPEAILCTEEIVEKIEPFKLAREVLLPKFDIPEQFI
DSKDDEDGGKRGENAFLRHLTYEGAKKRYGEITDEIRERLDFELETIERTGYPGYFLIVQ
DFTSAAREMGVSVGPGRGSAAGSAVAYCVGITNVDPIAYDLLFERFLNPDRVSLPDIDID
FDDEGRQRVIDYVIEKYGANQVAQIITYGTMAAKSAIRDTARVLNLPLPEADRLAKLVTD
IKLKALFELANDRTKLSAKLKNNNDNLEKALELIRISKGNDESSRTINQAKVLEGSVRNT
GIHACGVIITPDDITNFVPVALAKDSEMVCTQFDNSVVESAGLLKMDFLGLKTLTLIKDA
VRIIKERHGILLDPENFPIDDVKTYELFQRGETVGIFQYESAGMQKYMRELKPTVFADLI
AMNALYRPGPLEYIPSFIKRKHGLETITYDLEDMKEYLEETYGITVYQEQVMLLSQKLAD
FTKGEADVLRKAMGKKQKNVLDQMKPKFVNQAAAKGHDSKKLEKIWKDWEAFASYAFNKS
HSTCYAWIAYQTAYLKAHYPAEYMASVLSNNMNDITQVTFFMEECKRMGIQVLGPDVNES
KSDFTVNMEGQVRFGLAAIKGAGNAAVHAIIEEREKAGLYKDIFSFTKRVNLKAVNKKTM
EVLAMAGGFDCFVDFHRRQYLEAPEGEASLLEKAVKYAQKVIQEEESSQVSMFGGGGGLD
IPVPTIPPMEPFSQLQQLNIEKEVVGLYISGHPLDQYKVEIEAFTNTGLPELADVNKLKS
KGDIKIAGAVTSFAHRTTKNGKPFGTLTMEDYHGGHTFFIFGEDYVRFKEYFMHNWFLYI
TGAIHPKKYNPEEFEFKISQITLLNEIRGKMIKGLRVHIDLDDLGLELMEKLEAITQKYQ
GDAKLYINIIDNKENLTLDLISSKYRVDPSNELIEALNQIPEVAYKII
NT seq 4287 nt   +upstreamnt  +downstreamnt
atgtacctaatatttgatactgagactactggacttccgcgcaattacaatgcgcccatg
tctgaccttgacaattggccacgtttggttcaactggcctggcaacttcatgacgaaaaa
ggccgacttgtttcgaacaataactttatagtaaaacctgaaggatttaccattccctat
aactcggaaaaaatacatggtatttccactcaaagagccatcgatgaaggacatgaacta
agtaaggttctagaaatttttgaagaagacctccgcaaaacaacctatctcgttggtcat
aatattggctttgatatctccattgtaggggctgaattattgagaaccaacaagtctatt
aaagacttggaaaaagagccacttgatacgaaggatatttctactgaattctgtgccatt
cctggagggaaaggtgggaaattcaaatggcctaccctgcttgaacttcacaataaacta
tttggagaaggttttggcgacgcccatgatgctgcttatgatgtagatgctactgctaaa
agttttttcgggcttatcaaggaaggagttcagcctcctgttgaaggcgtagaactggat
gagataatttatgaggctccaaatctggaggccgctaattttgctgccgcaaaagacgat
gtcaaagtcacagcccaaaaggtccttaaggccgccaatcgtgcggacatttcagatctt
aaagacacgctttttactcacctgcatgtccatacccaattttctattctccaatctacc
tcagaaatacctgccgctatcaaaagggcaaaagaattagggatgccagcattggccatg
acagatcatggcaatatgatgggtgccttcaactttgttcgtgaggcatttaataatgac
atcaaaccaataatcggctgcgaattcaacctttgtcgagaccggaagaataagtccaat
aaagacgatggataccaaactgttttactggcaaaaaacaaagcaggttaccataacctg
gctaaactttcttcctatgccaatatagagggtttttattatgtgcctcggatagataga
gaggtgctggttcaatataagggtgacatcattgctaccacgggtggactttggggtgaa
atcccttacctcatcctcaatgtgggtgaaacccaggctgaagaggcttttgtatggtgg
ttggatcaatttggagaagatttttatatagagcttaaccgtcatggtattcccgaggag
gaaaaagtgaatgaagtgctcctccaatgggcagaaaaatacaaggtgaagtacttcgct
gccaataatacctattacaatgctcaggaagatgctaaatcacatgatattttattgtgt
gtgaaggatggagaactggtagaaaaacctaagaaatacataggaaagagaggccgggaa
tatcgatatggtttcccgaatgatgagttttatctcaaatcccctgaggagatgaagaag
ctttttgctgatttaccggaagccatcttatgtacagaggaaattgtagaaaagattgag
cctttcaaactggctagagaagttttgctgccaaaatttgatattccagaacaattcata
gactctaaagatgatgaagatgggggaaaaaggggagaaaatgcctttttgcgtcacctc
acttatgaaggagctaaaaaaagatatggagaaataacagatgagataagggaaaggttg
gatttcgaattggagactatcgaaagaaccggctatccaggttatttccttattgtacaa
gatttcaccagtgctgctagagaaatgggggtctcagtagggcctggaaggggttctgcc
gccggttctgcagtagcctattgtgtgggcatcaccaatgtggatccaattgcctacgac
ctactttttgagagattcctaaaccctgatagggtgtcactacccgatattgatattgac
tttgatgacgaagggagacaaagggtaatcgactatgttatagagaaatacggagccaat
caggtagcccaaatcattacttatggaacaatggcagccaaatctgccattcgtgatact
gcaagggtactcaaccttccccttcctgaagcagataggcttgccaaacttgtgacggat
atcaaacttaaggccctttttgaattggccaatgaccgtaccaagctatcagccaaactt
aaaaacaacaatgataatttagagaaagcattggagcttatccgaatttcaaaaggaaat
gacgaaagttcgagaacgattaatcaggccaaggtcctggaaggctctgtaagaaacaca
ggtatacacgcctgtggggttatcattacaccggatgacattaccaattttgtccctgta
gcacttgctaaggattctgaaatggtatgtacccaatttgataactccgttgttgaaagt
gccggcttacttaaaatggactttttgggtctgaaaaccctaaccctaatcaaggacgcg
gtaaggatcattaaggagcgacatggtatattactggatcctgagaactttcctattgat
gatgtaaagacgtatgaacttttccaaagaggtgaaacggtaggtatattccagtatgaa
tctgcaggtatgcaaaaatacatgagggagttaaaacctactgtatttgctgaccttatc
gccatgaatgccttgtacaggccaggtcctttggaatacattcctagtttcattaaaaga
aaacatggattagagaccattacttatgatctcgaggacatgaaggaatacctggaagaa
acttatgggatcacagtctaccaggaacaagtgatgcttctgtcgcagaagctggctgat
tttaccaaaggtgaggcagatgtactgcgtaaagccatgggtaagaaacagaagaacgtt
ctggatcagatgaagccaaagttcgtcaatcaggcagcagccaaaggccacgacagtaaa
aaattagaaaaaatatggaaagactgggaggcttttgcttcttatgcctttaacaagtcc
cactccacttgctacgcttggattgcctatcaaacggcctacctaaaagcacattaccct
gctgaatacatggcctcagtattgagcaataacatgaatgacattacgcaggtcaccttc
tttatggaagaatgtaagcgtatgggcattcaagttcttggtcctgatgttaatgagtcc
aaaagtgattttacagtaaatatggaaggacaggtaaggtttggtctggcagcaatcaaa
ggtgctggaaatgccgctgtacatgccataattgaagaaagggaaaaagcaggcctttac
aaagacatcttttcctttaccaaaagggtaaacctcaaagcagtcaataaaaaaaccatg
gaagtattggccatggctggtggttttgattgttttgtagactttcaccgcagacaatac
ctagaagcacccgaaggagaggcttctcttttagagaaagccgtaaaatatgcgcagaag
gtaattcaagaagaagaaagttcacaggtctcaatgtttggcggcggtggtggattggac
attcctgttccaactattcctcctatggaaccctttagtcaattgcaacagttgaatatt
gaaaaggaagtcgtagggctttatatttctggtcatcctctggatcagtacaaggtggag
atagaagcatttaccaatacaggattaccagaactggcagatgtcaataagctgaaatcg
aaaggagatattaaaattgcaggtgccgtaacctcctttgcccaccgaacaactaaaaat
ggaaaaccgtttggcacccttaccatggaagattatcatggtggccatacctttttcatc
tttggggaggattatgtgagattcaaggagtatttcatgcacaactggtttttatatatt
acaggtgctatccatccaaaaaaatacaaccctgaagaatttgaatttaaaatcagccaa
atcactttactaaatgaaataagaggtaaaatgattaaaggtttaagggtgcatatagac
ctggatgatcttggattggaattaatggaaaaattagaggccattacccaaaaataccaa
ggtgatgctaaattatatataaatattatagacaataaagagaatttgacattggatctt
atatcctccaagtacagggtagacccatcaaatgaactaatcgaagcattgaatcaaatc
cccgaagttgcctacaaaatcatttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (22)   

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