KEGG   Capsicum annuum (peppers): 107850363
Entry
107850363         CDS       T04646                                 
Name
(RefSeq) sister chromatid cohesion 1 protein 4 isoform X1
  KO
K06670  cohesin complex subunit SCC1
Organism
cann  Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:cann00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cann03036]
    107850363
Chromosome and associated proteins [BR:cann03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    107850363
SSDB
Motif
Pfam: Rad21_Rec8_N Rad21_Rec8
Other DBs
NCBI-GeneID: 107850363
NCBI-ProteinID: XP_016550324
Position
12:8038509..8056217
AA seq 1319 aa
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILSPDVPIALRLSSHLL
VGVVRIYSRKVGYLFDDCSEALLKVKQAFRSAAVDLPPEESKAPYHSITLPETFELDDFE
LPDNEIFQGNVDHHISSREQITLQDNMEGVVYSTSKFGLDERFGDGDTSGLDLDEELFLD
KVAAAGDASGSADPQASVEPMTPIKQEEHHEEMAANSEVVFDGVDGDADFMDHAPCTPGL
AEEPNLSNIQEISACEDHLGLEDHHVTEYAVKANSANLSFENNVNNGSELLENQALTAGS
NAEQPVKGYSENLSCENNMNNGSGILEYQALTDGSNTDIVHSVAAEENGHHLGNRCDKQL
VPDCQLPPSGVANVPVSSSDPAVAPGLSSAAVDQVNAKSSVLECPDKIVAASDGQTNERS
LQCMPSGMDKVDVSTPGGFPNEAPFPNGISSTKVVHDVSALSSICQPVNEDISLSNQRSP
EAVSNNVAIPGNLEAGESQDRNCLETPKTVDCPVQSVFGEDASAAQVHFLSRCNAAQFDA
SKSSCEHVFNHEPPSNSFGFHQPETFKEGELHPKGYLEQTLKENLIKEPVLCEDIRKDSD
KSTDQVDNVVQEQRRIDIMSSAAASSLPAPEKILSMSGGLVDLPRSIFPEATPDYLVGIN
EADAGSKFISGKKRSYTESTLTEQSLNSAESSRIVRSKMSVGFVPDDDDLLSSILVGRRS
SALKLKATPLPSEITSNKRARSAARMSASKRKVLMDDVMVLHGDMIRQQLMHSEDIRRVR
KKAPCTHAEISAIQKQLLEDEIFRAPILTGLSVELASLHNKTFDLSTVKVVSSSDVSSCH
AEMAVGPQLSAEYAENSISNLEEQRQQLSVENAKNPISNLEEQRQQLTDEYAENPITNLE
EQLATMFDGPHVERGSGKEGSDDRFVVRDDSISGAVEAPVPTENREVDEHHQYLNSDASQ
LRPDAVTDVAVANGFHLEPSDNAAEIGPQVTYLSGAEAAEAADTVSAAKELLAYTKNGGL
GGDGDIMAVPTLTDSFNESGREGAVIIPEVSYGSPNRAPAAQVDKALEKLNNENLGVSSD
WPESNYFTSETEAGPENMVDDAVLLEAAQDSATVEIATSLEHIVAENVNQSFGDKGIVTE
QPNTDASHDETNMHMLDHSIEAGDYPCKQEGFSYYMMGADVTDANPDDLNQDLDYSAVGN
DTGFLNSDDDDDDDEEAEAAADDYVPDADVARITENIGWSSRTRAVSKYLQTLFIKESER
GRTSISMDSLLVGKTRKEASRLFFETLVLKTRDYLHVEQLIPFDDVTIKPRMKLMKSDF
NT seq 3960 nt   +upstreamnt  +downstreamnt
atgttttactcacagttcatattggccaaaaagggtcctttgggaaccatatggattgca
gcacatttggaaaggaaacttcggaagaatcaagttgctgatactgatattggcgtctct
gtagactcaattctttctcctgacgtgccaattgcattgcggttatctagccatcttctg
gttggagttgtgaggatatattctcgaaaggtgggttacctattcgatgattgcagtgag
gctttgctaaaagtcaagcaagcttttcgctccgctgctgtggatttaccacccgaagaa
tctaaggctccatatcactcgatcaccttaccagagacttttgaacttgatgattttgaa
ttgccagacaatgagatttttcaaggtaacgtggaccatcatattagttcaagggagcag
atcacactacaagataacatggagggcgtggtttactcaacttcaaagtttggattggat
gagagatttggggatggcgacacttctggtttagaccttgatgaggaattatttttggac
aaggttgctgctgctggagatgctagtgggagtgctgatcctcaagcatctgttgaacca
atgacaccaatcaaacaagaagaacaccacgaagagatggctgcaaattccgaggttgtg
ttcgatggagttgatggagatgctgatttcatggatcatgctccatgtacacctgggttg
gcggaagaacccaacttgtctaacattcaggaaatatcagcatgcgaggaccatctagga
ctggaagatcatcatgtgacggaatatgctgtaaaagcaaattcagcgaatctctctttt
gaaaataatgtgaataacgggagtgaacttctagaaaatcaggcattaactgctggctcg
aatgctgaacagcctgtaaaaggatattcagagaatctctcttgtgaaaataacatgaat
aacgggagtgggattctagaatatcaggcattaactgatggttcgaatactgatattgtt
cactctgtggctgctgaggagaatggtcaccatttaggcaacaggtgcgacaaacaactg
gtgccagattgtcagctgcctccaagtggagttgcaaatgttcctgtgtcgtcaagtgat
cctgctgtagcacctggactatcctctgctgctgttgatcaggttaatgcaaaatcatct
gtactagaatgtccggataagattgttgctgcatctgatggtcaaacaaatgagaggagc
ttgcagtgcatgccttctggcatggacaaggttgatgtatctacccctggtggcttcccc
aacgaggctccatttccaaatggaattagttcgacaaaagttgtccatgatgtttctgct
ttaagtagcatctgccagccagttaatgaagatatttcactgagtaatcagagatcacct
gaggcagtctcaaataatgttgcaattccaggaaacttggaagctggtgaatcccaagat
agaaattgcttagaaacaccaaagaccgttgattgcccggtacaaagtgtttttggtgaa
gacgccagcgctgcccaggttcattttctgagtcgatgtaatgctgctcaatttgatgca
tcgaaatcgagctgtgagcatgtttttaatcacgagccaccgtcaaattcttttggtttc
caccagccagaaacttttaaggagggggaattacaccctaaaggttatttagaacaaacc
ttaaaagaaaatctcatcaaagaacctgttctgtgcgaagacattcggaaagattctgac
aaatcaactgatcaagtggataatgttgttcaagaacaacgccgcatagacattatgagc
agtgcagctgcttcttccttgccagctcctgaaaagattttatcaatgtcaggaggactt
gttgatttacctaggagtatttttccagaggctacaccggattacttggtggggatcaat
gaggctgatgctggcagtaaattcatttcaggaaagaaacgcagttacactgagagcaca
ctaacagagcagagtctcaactcagctgaatcttcaaggatcgtccgttccaaaatgtct
gtgggatttgttcctgatgatgatgatttgctctcttctatactagttggaagaagatct
tcagcattgaagcttaaggctactcctctaccttctgagattacatcaaacaagcgtgcc
cgatctgctgcccggatgagtgccagtaaaaggaaggttcttatggatgatgtcatggtc
ttgcatggagatatgataagacaacagttgatgcattctgaggacattcgtcgcgtaagg
aagaaagctccttgcacacatgctgaaatctcagcaatccagaaacagttgttggaagat
gaaattttcagagcaccaatattaactggtttgtcagtggaattggcttctttacataat
aaaacatttgacttgagtacagtcaaggtggtctcttctagtgatgttagcagttgtcat
gctgagatggcggtcggcccccagctatctgctgagtatgctgagaattccatttcaaat
ttggaggaacagcgtcaacagctaagtgttgagaatgctaaaaatcccatctcaaatttg
gaggaacaacgtcaacagctaactgatgagtatgctgaaaaccccatcacaaatttggag
gaacaactggcaacgatgttcgatgggccacacgttgaaagaggaagtggaaaggaagga
agtgatgaccggtttgtagttagagatgatagcatatcaggagctgttgaggctcctgtt
ccaactgagaaccgggaagttgatgagcatcaccaatatttaaatagtgatgcgtctcaa
ttgcggccagacgccgtcactgatgtagcagtggccaatggctttcatctcgaaccttca
gataatgctgcagaaataggacctcaggtaacatacctttcaggtgctgaggcagctgaa
gcagcagatactgtctctgccgctaaagaattattggcatatactaaaaatggtggatta
ggtggcgatggtgatatcatggcagttccaactctaacagattcatttaatgagtccgga
agggaaggtgctgttattataccggaagtatcatatggatctcctaatcgtgcaccggct
gctcaagttgataaggctctggaaaagttgaacaatgaaaaccttggagttagtagtgac
tggccagaaagcaactactttacttctgaaactgaagctggaccggaaaatatggtagat
gatgcagttctattggaggctgcccaagacagtgctacagttgaaattgcaactagttta
gaacatatagtagcagagaatgtcaaccagagctttggtgataagggtatagtcactgaa
caacccaacacagatgcttcacatgatgagacgaatatgcatatgctagatcattccata
gaagccggagactatccatgtaaacaagaaggtttctcctactatatgatgggtgcagat
gtcactgatgccaatccggatgacctaaatcaggatctagattactcagctgttggaaac
gatacagggtttctgaactccgatgatgatgatgatgatgatgaagaagctgaagcagct
gctgatgattatgtacctgatgctgatgtcgcccgtatcactgagaacattggatggtct
tctcgtactagggctgtttccaagtatctccagaccttgtttattaaggaatctgagcgt
gggagaacgtccatctccatggacagtctgttagttggtaaaacacgaaaggaggcgtca
agattgttttttgaaactttggttcttaaaacaagagattaccttcatgtagagcaactg
ataccatttgacgatgtcacaataaagcctcgaatgaagcttatgaaatcagacttttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (10)   
   RefSeq(nuc) (6)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system