KEGG   Capsicum annuum (peppers): 107863966
Entry
107863966         CDS       T04646                                 
Name
(RefSeq) RNA-binding protein BRN1 isoform X1
  KO
K13207  CUG-BP- and ETR3-like factor
Organism
cann  Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:cann00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cann03041]
    107863966
Spliceosome [BR:cann03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    107863966
SSDB
Motif
Pfam: RRM_1 RRM_7 BRAP2 GHMP_kinases_C
Other DBs
NCBI-GeneID: 107863966
NCBI-ProteinID: XP_016565678
Position
3:34686878..34693754
AA seq 434 aa
MAEERQQHEEQSEGRVKLFVGQVPKHMTEAQLLEMFQEFAIIDEVNIIKDKITRASRGCC
FVICPSREEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSDPEV
SALFSQYGVIKDLQILRGSQQTSKGCAFLKYEKKEQAVAAIEALNGKHKMEGATVPLVVK
WADTEKERQARRAQKALSQASNASDSRHPSLFGALPMGYMPPYNGYGYQTPGAYGLMQYR
LPSMQNQAAFQNLVPPINQASAVRGGAPDLSPGISPRNYPMSPGSYAGSAYPAVPGMQYP
MPYPRGVMNARPPSGSPGSMPPSTTNSHSAASSSVSSSTGGQVEGPPGANLFIYHIPQEF
GDQELANAFQPFGRVLSAKVFVDKMTGVSKCFGFVSYDSPAAAQTAISMMNGCQLGSKKL
KVQLKRDNKQNKHY
NT seq 1305 nt   +upstreamnt  +downstreamnt
atggcggaggaacggcaacagcatgaggagcaaagcgagggaagggtgaagttgttcgta
ggtcaagtaccgaagcacatgacggaagcacagctactcgaaatgtttcaagagtttgct
attatagatgaagtgaacataatcaaagataaaattacgcgtgcttctcgaggatgttgt
tttgtgatctgtccatctagagaagaagcggataaggctgttaatgcatgtcacaacaag
aaaacgcttcccggagcttctagtccgttgcaagtgaagtatgctgatggcgagttggaa
agactagagcacaagctttttgttggtatgcttccgaagaatgtttctgaccctgaagta
tctgctttgttctctcaatatggagtcattaaagatttgcagatcctcagaggttctcag
caaaccagtaaaggatgtgcttttctgaagtatgagaaaaaagaacaagcagttgcagca
atagaagccctcaatggaaagcataagatggagggtgctactgtccctttggtagtcaaa
tgggcagatactgagaaggaaaggcaggcccggagggctcagaaagctctatctcaagct
tctaatgcatctgactctagacatccctctttatttggagccctaccaatgggttacatg
ccaccatacaatggctacggttatcagactcctggggcatatgggctcatgcaatatcgc
ctaccatcaatgcagaatcaggctgcatttcagaatttagtcccaccaataaaccaagca
agtgctgtacgtggaggtgcacctgatctttcacctggaattagcccaagaaattatccc
atgtcgcctggaagttatgctggatccgcttaccctgctgttccagggatgcagtatcca
atgccatatcctagaggcgttatgaatgccagaccaccaagtggttctcccggttcaatg
ccccctagtacgacaaacagtcattctgcagcatcttcaagtgtcagttcaagtacaggg
ggtcaggttgaaggtccacctggtgctaatctattcatttaccacattcctcaagaattt
ggtgatcaagagcttgcaaatgcatttcagccttttggtagggtcctgagtgccaaggtt
ttcgttgacaaaatgactggtgttagcaaatgttttggatttgtaagttatgactctcca
gcagctgcacaaactgcaatcagtatgatgaatggttgccaattaggtagtaagaagttg
aaggtgcagcttaaaagggacaacaaacagaataaacattattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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