KEGG   Collimonas arenae: LT85_3560
Entry
LT85_3560         CDS       T03512                                 
Symbol
vgrG
Name
(GenBank) VgrG protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
care  Collimonas arenae
Pathway
care03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:care00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LT85_3560 (vgrG)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:care02044]
    LT85_3560 (vgrG)
Secretion system [BR:care02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LT85_3560 (vgrG)
SSDB
Motif
Pfam: Phage_GPD Phage_base_V DUF6484 DUF2345
Other DBs
NCBI-ProteinID: AIY42718
UniProt: A0A0A1FD95
Position
complement(4019264..4021507)
AA seq 747 aa
MYPNASALLARVGRFNQDRRLVRIKTPLDADLLLVHRLHGSEALSKPFDLTLELLSPYDQ
LELKQLVGQPVLLTMQTRSGERHFHGFVKEFARTGSDGGMAVYQAQLAPWFSFLDYASNC
RVFQDLSVLDIAQRVFQKYNQLADYRFDLIASRYPKLSYCVQYNESDFSFVSRLLEDAGI
YYSFEHSESGHKLVLADDSTQCLPLEENATVRFQPNQELKASDVLDDWQPRRRIGTTVHS
LKSFDFKQPRNPLAAEQKTDAPRGSLPQFERYAYDGSARYGNSAIGEQLTAVRAEEAGWQ
TKLFEGAGTNRELVAGRYFDLQGHFEHESSDIAEHRFIALQVTHDARNNFSNDFSDVQDC
VYRAGVTALRRKIPFRPLRDTARPRMPGPQTATVVGPKGEEIWADKYGRVKLQFHWDRQG
QFNDQSSCWVRVASPWAGSGMGGVSAPRIGQEVVVDFLDGNPDRPIITGRVYNADNMPPF
GQEVSGMRSKTVRGGGFNEVTMHDSAGGELLNMHAQRDMAVTVLNDHNSTVKNNKATKVT
VNHSLDVGANQDISVGGNRGATVTGTDTRTVTGTDTATVTGAVTQTYHAGQKRTITAAGY
NENITGDYGSTLLGNYSGNTNGNWKRDITGTLTHTVTGAVTDTMYAGREVSVTGTDKRTV
TGPVEDNNTGHRLLSVTGDMQHEVSGTHSVYSGANQTMTSASKIELGVGSAVISIDAGEI
TITAGGSVIKINGGGVAINGSKINLNS
NT seq 2244 nt   +upstreamnt  +downstreamnt
atgtatccaaacgcctctgcattgctggcccgggtgggccgtttcaatcaagaccggcgc
ctggtccggatcaagacgccactggacgccgacctgctgctggtgcaccggctacatggc
agcgaagcgttatccaaacctttcgacctgacgctggaattgttgtctccctacgaccag
ctggaactcaagcaactggtcggccagccagtgttgctgaccatgcaaacacgctccggc
gaaagacatttccatggctttgtgaaagagttcgcgcgcaccggtagcgatggcggcatg
gctgtttaccaggcgcagttggcgccttggttttcctttcttgattacgccagcaattgc
cgcgtgttccaggatctgtcggtgctagacatcgcgcagagagtgttccagaagtacaac
cagctagccgactatcgcttcgatctgatcgccagccgttacccgaagctgtcttattgc
gtgcaatacaacgaatccgattttagcttcgtctcgcgcctgcttgaagacgccggcatt
tactatagcttcgagcatagcgagagcggccacaagctggtgctggctgacgattccacc
cagtgcctgccgctggaagaaaatgccacggtacgtttccagccgaaccaggaattgaag
gccagcgacgtcctcgatgactggcagccgcgccgcaggatcggcactacggtgcacagc
ctcaagagtttcgatttcaagcagccgcgcaacccgctggcggcggagcaaaagaccgat
gcgcctcgcggtagtttgccgcagtttgagcgctatgcctatgacggctccgccagatac
ggcaacagcgccatcggcgagcaattgaccgcggtgcgcgccgaagaagccggctggcag
accaagctgttcgaaggtgcaggcaccaatcgcgaactggtcgccggccgttacttcgat
ctgcaaggccatttcgagcacgagagcagcgacatcgccgagcatcgcttcatcgccttg
caggtcacgcacgatgcacgaaataatttttccaacgattttagcgacgtccaggattgc
gtctaccgcgccggcgtcaccgccttgcgccgcaagattccattcaggcccttgcgcgac
acagccagaccgcgcatgccgggaccgcagacggcgaccgtggtggggccaaaaggcgaa
gagatttgggccgataaatacggccgcgtgaaactgcagttccattgggatcggcaaggg
cagttcaatgaccagagttcttgctgggtgcgggtcgccagcccgtgggcgggcagcggc
atgggtggcgtgtcggcgccgcgtatcggccaggaagtggtggtcgatttcctcgacggc
aatccggaccggcctatcattaccggccgcgtctacaacgccgacaacatgccgccgttt
ggccaggaggtcagcggcatgcgttcgaaaacagtgcgcggcggcggtttcaacgaagtc
accatgcacgactcggccggcggcgaactgctaaacatgcacgctcagcgcgatatggcg
gtaacggtgctaaacgaccacaacagtaccgtcaagaacaacaaggcgaccaaggtcact
gtcaaccacagcctggacgtcggcgccaaccaggatatctcggtagggggtaatcgcgga
gcgacggtgaccggtaccgatacccgcaccgtcaccggcaccgataccgcaacggtgact
ggagccgtgacgcaaacctatcatgccggccagaagcggacgattaccgcggcgggctat
aacgaaaacatcaccggcgattacggcagcaccttgcttggcaattacagcggcaatacc
aatggcaactggaaacgcgatattaccggcacgctcacacacaccgtgaccggcgccgtc
accgacaccatgtatgccggccgcgaggtgagcgtaaccggcaccgacaagcgtaccgta
accggtccggtagaagacaacaataccggccaccgtctgctatcggtaaccggcgacatg
cagcacgaggtgtctggtacgcattctgtttattccggcgccaaccagaccatgacttct
gccagcaagatcgaattgggcgtcggtagcgccgtcatcagcatcgacgccggcgaaatc
actatcaccgccggtggatcggtcatcaagatcaatggcggcggagtcgcgatcaatggc
agcaagataaatctgaatagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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