KEGG   Croceibacter atlanticus: CA2559_08006
Entry
CA2559_08006      CDS       T01256                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
cat  Croceibacter atlanticus
Brite
KEGG Orthology (KO) [BR:cat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cat03009]
    CA2559_08006
Enzymes [BR:cat01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     CA2559_08006
Ribosome biogenesis [BR:cat03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CA2559_08006
SSDB
Motif
Pfam: PseudoU_synth_2 S4 ThiS
Other DBs
NCBI-ProteinID: EAP85960
UniProt: A3UBF9
Position
1757677..1758747
AA seq 356 aa
MTQNSKLSPKGFDTSNSSEDNDDDLYEHYAFTASKGQEPLRVDKFLMNFIENATRNKIQK
AAKEGNIYVNDAVVKQNYKVKAGDEVKVLFEHPPYEMLLTPEDIPLNIVHEDDDVLVVNK
PAGMVVHPGHGNYSGTLINALVFHFDNLPNNSSNRPGLVHRIDKDTSGLLVVAKTEHAMT
HLSKQFFNKTSSREYIALVWGNVEDDQGTIEGHIGRHPKNRLQNTVFLEDDADEKGKPAV
THYKVIERLGYVTLLSCKLETGRTHQIRVHLKHIGHTLFNDERYGGDKILKGTHFSKYKQ
FVDNCFKTLPRQALHAKTLGFEHPVSGEWLSFDSEIPKDISDCVDKWRNYATHAMD
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgacacagaacagtaaacttagccctaaagggtttgacacatcaaactcatcagaagat
aatgatgatgacctgtatgaacactatgcctttacagctagcaaaggacaggaaccgtta
cgagtagataaatttttaatgaatttcattgaaaatgcaacacgtaataaaatacagaaa
gcagccaaagaaggtaatatttatgtaaatgatgctgttgtaaaacaaaactacaaagta
aaagcaggcgatgaggttaaggtgttatttgagcatccgccttatgaaatgttgcttacg
cctgaagatatacctttaaacattgttcacgaagatgacgatgtactggtagttaataag
cctgccggtatggttgttcatcctggtcatggtaattactcaggaaccttaataaatgca
ttagtttttcactttgataacttaccaaataatagcagtaaccgtccaggtttagtgcat
aggattgataaagatacaagtggtttattagttgtagctaagacagaacatgcaatgacg
catttgtctaaacagttttttaataagacaagctctagagaatacatagccttagtatgg
ggaaatgttgaagatgatcaaggtactatagaaggtcatattggaagacaccctaaaaat
agattacagaataccgtatttttagaagatgatgccgatgaaaaaggtaagccagccgtt
acacattataaagtgatagagcgtttagggtacgtaacattattatcttgtaaattagaa
acaggacgcacgcaccaaattcgtgttcatttaaaacatattggtcatactctttttaac
gatgaacgttatggaggtgataaaatcttaaaaggaacacactttagtaagtacaaacag
tttgtggataattgctttaaaacgttaccacgacaagccctacacgctaaaactttgggg
tttgaacatccagtgtctggcgagtggttaagttttgattctgaaatcccaaaggatata
agtgactgtgtagacaagtggcgtaattatgccacacacgctatggactaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (58)   
   KEGG ORTHOLOGY (1)   
   RefGene (55)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (67)   

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