KEGG   Carassius auratus (goldfish): 113060289
Entry
113060289         CDS       T07313                                 
Name
(RefSeq) contactin-1-like isoform X1
  KO
K06759  contactin 1
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:caua00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    113060289
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:caua04515]
    113060289
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:caua00537]
    113060289
Cell adhesion molecules [BR:caua04515]
 Immunoglobulin superfamily
  Contactins
   113060289
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:caua00537]
 Others
  113060289
SSDB
Motif
Pfam: Ig_3 I-set ig Ig_2 fn3 V-set Ig_C17orf99
Other DBs
NCBI-GeneID: 113060289
NCBI-ProteinID: XP_026084961
Ensembl: ENSCARG00000068699
UniProt: A0A6P6LN99
Position
4:complement(15230487..15242190)
AA seq 1029 aa
MVSPAMLLCVLSYFFLLAAAIKPRIFEPRIFDKEATGFGPIFEEEPLDTVYAEDSPENKI
SMNCRARANPPALIKWWLNNWEIKLMEQPDEHFSLVGGNLVITNPDKGKHAGKYVCVAKN
VYGTVISKEATVKFGYLNQFPTDEREPVHVKEGQGAVLLCSPPSRYPSEVLFRWIYNDFP
NFIIPDQRRFVSQTTGNMYIAKVEASDVGNYSCFVSSPTIGKSVFSMPIPLLPQIEKEVK
RYPADIRVKFPKTYALVHQNITLECFALGNPLPHIRWRKLDADLPPNYEVSMNGALLHLI
NVQYEDEGSYECETLNVKGMDWYRQWLYVEGAPEWAEHINDTEKDVGSELTLRCVAVGKP
LPWIRWLKDGYSYGKGELKFSSLTFEDSGMYQCVAENEWGTIYASAELRVVSCAPTFIYN
PVKKVLLGAEKGRVVIECKPRAAPKPKFIWKRGSELLTNSSRMLIWDDGSLEILNVSKSD
EGSYTCYAENDRGKSNSTGTLTITEATKITVAPSDTEAVVGDTAILQCSASFDPSLDITF
IWTVDSYVINFYTDFEHYELIMGHENRGDLLIKNIQVRHAGHYSCTAQTIVDNATAEADV
SVRGLPGPPGGVRVEEIGDTSVKLRWSLGSDHGSSLIQHVVQTRDFYALDPEDWKTASTS
PVFLDGSAESATVLDLYPWMQYEFRVHAINEFGAGENSRPSIKIKTWDARPTVAPSDVIG
QVGISGELIVTWTPVKPQFFFGKKFGYTVAFKQHEDYEWKWSTVEDPETRRYIYKESMTP
DTEIQVKVSTYNNKGEGPSSLISVVYSPRLAPTEAPLDVYARQVTSTEALVWWLPVYQAP
PNWVDGYQIRYWRKYDDNEAAASRVIVHRTINQTRLENMRPDSHYLIEVRAFNGAGLGPP
SEHCEMFTRRPPPSRLLRVYKYVSFNRKWLYLYWDHIYNYWNESYVEGYKILFRKEGERY
GKLYTTGRHYIDFPMPETGDYVIEVRARCEGGDGPISQIRVQGKASLGPESLSVAAVLLL
ALGWMNLGL
NT seq 3090 nt   +upstreamnt  +downstreamnt
atggtgtccccagccatgcttctgtgtgtgctctcttacttcttcttattagccgctgca
attaaacccaggatatttgaacccagaatttttgacaaggaggccacaggctttgggccc
atttttgaggaggagcccttggacacagtgtatgcggaggattcaccagagaacaaaatc
tccatgaactgcagggcgcgggccaaccctccggcccttatcaaatggtggttaaacaac
tgggaaattaaactgatggaacagcctgatgagcactttagcctggtgggaggaaacctg
gtcatcaccaacccagacaagggcaagcatgctgggaaatatgtgtgtgtggctaagaac
gtgtatggcactgtcatcagcaaagaggccaccgtcaaatttggatacctcaaccagttc
cctacagatgagagagagccggtgcatgttaaggaaggacagggagcagtgctgctgtgt
tctcctccctctcgctatccgagtgaggtgttgttccgctggatctacaacgacttcccc
aacttcatcatcccagaccagaggcgcttcgtgtctcagaccactgggaatatgtacatc
gctaaagttgaggcatctgatgttgggaattattcttgcttcgtgtccagccccaccatc
ggcaagagtgttttcagcatgccgattcctctgcttccgcaaatagagaaggaggtgaag
cgctatcctgctgatatccgtgtgaagttccccaagacttatgctttggtgcatcagaac
atcactctggagtgctttgccctcggaaatccgctcccacacatccgctggaggaagtta
gacgctgatctcccgcccaactatgaggtcagcatgaacggagctttactgcacctgatt
aacgttcagtacgaggatgaagggagctacgagtgcgagacgctcaacgttaaagggatg
gactggtatcgacagtggctctatgtggaaggtgctccagagtgggcagagcacatcaat
gacacggagaaagatgttggaagtgaactcactctcagatgtgttgctgtggggaagcct
ttaccatggattcggtggctgaaggacggctattcgtacggcaaaggggagctgaagttc
tccagtctcacgtttgaggactcggggatgtatcagtgtgttgctgagaatgaatggggg
actatctatgccagcgccgagcttcgagtcgtctcctgcgcaccaacattcatttacaat
ccagtgaagaaggttctgctcggggctgaaaagggccgtgtggttatagagtgcaaaccc
cgcgctgctcctaaacccaagttcatctggaaacgaggctcagagctgctgaccaactct
tcaaggatgttaatttgggatgatggaagtctggagattctgaacgtgtcaaaaagtgac
gagggctcgtacacatgctatgcagagaatgaccgcggcaaatccaacagcacagggacc
ctcactatcaccgaggccaccaaaatcacggtggctccatcagacactgaggcagttgta
ggagacaccgcgattctccagtgctctgcatcatttgatcccagcctggacatcaccttc
atctggactgttgattcctacgtcatcaacttctacacagacttcgaacactacgagcta
atcatgggtcacgagaacagaggagacctgttgatcaagaacattcaggtgaggcatgca
ggacactattcctgcacagctcagactatagtggacaacgccactgcagaagctgatgtt
tctgtcagaggtctgcctggtcctccaggtggtgtccgtgtggaagagattggggacacg
tcagtaaaactacgatggagtctgggatcagaccacggtagttctcttatccaacatgtt
gtacaaacacgagacttttacgccctggatccagaggactggaaaaccgcatccacctct
cctgtgtttttggacggatctgcggagtcggccaccgttcttgacctttacccctggatg
caatatgaattccgtgtgcatgccatcaatgaatttggagcaggggaaaacagccgccca
tcaatcaaaatcaagacatgggacgccaggcctacagtggctccttctgatgtcattggg
caagttggaataagcggagagctcatcgtgacctggactcctgtcaagcctcagttcttc
tttggtaaaaaatttggctacactgtggcgtttaagcagcatgaggattatgaatggaaa
tggtcaactgtggaggatcctgagactagacgatacatctacaaagagagcatgacccca
gacactgagattcaggtcaaagtgagcacctacaataacaaaggagaaggaccctcaagt
cttatatcagtggtctactcaccaaggcttgcaccgactgaagctccattagacgtctac
gcccgccaggtcacctctacagaagctttggtctggtggttacccgtctaccaggcgccg
ccaaactgggtcgacggataccagattcgttactggaggaagtacgatgataatgaggct
gctgcctctcgagttatcgtgcacagaacaattaaccaaacacgcctggagaacatgcgg
cctgactcccactacctcatagaggtgcgagcgttcaacggagctgggctcgggccaccc
agcgagcattgtgaaatgttcaccaggagaccacccccaagtcgcctattgagagtatac
aaatatgtcagcttcaatcgcaaatggctctatctgtactgggatcacatctataactac
tggaatgagtcctatgtggagggatacaagattttgttccggaaggaaggagagcgttat
gggaagctttacaccacaggcaggcactacatcgactttcccatgccagagacgggcgat
tacgtcatagaggtgcgagcccgctgtgagggaggtgatggacccatatcacagatcaga
gtacaagggaaagcctctctgggccctgagtctctcagcgtcgccgctgtcttgctgctg
gcactgggctggatgaatttaggcctgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (23)   

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