KEGG   Berryella intestinalis: JI75_08295
Entry
JI75_08295        CDS       T03545                                 
Name
(GenBank) endonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
cbac  Berryella intestinalis
Pathway
cbac03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cbac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    JI75_08295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbac03400]
    JI75_08295
Enzymes [BR:cbac01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     JI75_08295
DNA repair and recombination proteins [BR:cbac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     JI75_08295
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: AJC12644
UniProt: A0A0A8B5M6
Position
complement(1839065..1839898)
AA seq 277 aa
MLTLGCHLSIAKGFAAAARDARRIGANTFQFFTRNPRGGKAKAIDPADLERFHAECAEAG
IERILAHAPYTLNPASSNPQTREFALVTLAEDLARMENTPGQMYNFHPGAHVGQGSERGI
ELIAEALNQVLRPGQTTTVLLETMAGKGTEVGCTFEELAAIIDRVDLGDRMGVCLDTCHV
WDGGYDIAGDLERVLDRFDQVLGIDRLRALHLNDSKNPLGAHKDRHERLGEGFIGIGAFE
AVVTHPVLRKLPLYLETPQDSLDGYAAEIALLRSFSQ
NT seq 834 nt   +upstreamnt  +downstreamnt
atgcttacgcttgggtgccacctttccattgcgaagggctttgccgctgctgcccgcgat
gcccgccgcatcggggcgaacacgttccagttcttcacgcgcaacccgcgcgggggaaag
gccaaggcgatcgatccggccgatctcgagcgttttcacgcggagtgcgcggaggcggga
atcgagcgcatcctggcccatgccccctatacgctgaaccccgcgtcgtcgaacccccag
acgcgcgagttcgcgctggtcactttggcggaggatctggcccgtatggagaacacgccc
ggccagatgtacaacttccaccccggcgcccatgtgggccagggatcggagcgcgggatc
gagctcatagcggaggctttgaaccaggtgcttcgtcccggccagaccacgacggtgctt
ttggagaccatggccggcaaggggaccgaggtcggctgcacgttcgaggagctggcggcc
attatcgaccgcgtcgacctgggcgatcgcatgggcgtgtgcctggacacgtgccacgtg
tgggacggaggctacgatattgcgggcgatctggagagggttctggatcgcttcgaccag
gtgctggggatcgaccggttgagggcgctgcatctgaacgacagcaagaacccgcttggg
gcccataaggatcgccacgagcggctgggcgagggcttcatcggcatcggtgcattcgag
gccgtcgtgactcacccggttttgcggaagctgcccctgtatctggagacgccccaggac
agcctggacgggtacgccgcagagatcgcgctgctgcgttctttttcgcagtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

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