KEGG   Clostridium botulinum B1 Okra: CLD_1676
Entry
CLD_1676          CDS       T00671                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
cbb  Clostridium botulinum B1 Okra
Pathway
cbb00740  Riboflavin metabolism
cbb01100  Metabolic pathways
cbb01110  Biosynthesis of secondary metabolites
cbb01240  Biosynthesis of cofactors
cbb02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:cbb00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    CLD_1676 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CLD_1676 (ribD)
Enzymes [BR:cbb01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     CLD_1676 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     CLD_1676 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD GshA
Other DBs
NCBI-ProteinID: ACA45162
UniProt: B1IL48
Position
complement(3096511..3097608)
AA seq 365 aa
MEDYNFHMEKALKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFGGPHAEVYALREA
GEKAKGATIYVTLEPCSHYGKTPPCAESIVKMGISKAIIAMKDPNPLVEGRGIDILKQNG
IEVVTGIMEKESKKLNEVFIKYITKKKPFVVLKTASTLDGKIATRTGESKWITGEEARYK
VQQIRNDLSGIMVGIDTVIKDNPLLTTRIEGGRSPKAIIVDSNLRIPLESKILETFNKRA
IYIAATKKHKNPSKKNALENLGAKVLEFEENEEGKVPLNELMQYLVSEGVDSILLEGGST
LNFSALKEGIVDKVMCFIAPKIMGGQDSKNMIGGNGVESLKDIFKLENLKFEKIGQDILI
EGYVY
NT seq 1098 nt   +upstreamnt  +downstreamnt
atggaagattataattttcatatggaaaaagccttgaaactagctgaaagaggtgagggt
aaagttaatcctaatcctaaagtaggagctatagtagttaaaaacaacaaaataattgga
gaaggttatcacaaatattttggaggacctcatgcagaagtttatgctcttagagaagca
ggagaaaaggctaaaggggctactatatatgttacattagagccctgctcacattatggt
aaaactcctccctgtgcagagtctatagtaaagatgggaatatctaaggctattatagct
atgaaagatcccaatcctttagttgagggtagaggaatagatattttaaagcaaaatgga
atagaagttgtaacagggattatggaaaaagaaagtaaaaaattaaatgaagtctttata
aaatacataactaaaaagaaaccttttgtagttttaaaaactgcttctacattagatggt
aagattgctacaagaacaggagaatcaaaatggataacaggagaagaggcaagatataaa
gtacagcaaataagaaatgatttatccggaataatggtaggcatagatacagttataaag
gataatcctcttttaactacaagaatagaagggggaagaagcccaaaggcaataatagta
gattccaatcttagaattcccttagaatctaaaatattagaaacctttaataaaagagct
atttatatagccgcaactaaaaaacataagaacccatcaaaaaagaatgctttagaaaat
ttaggggctaaggttttagagtttgaggaaaatgaagagggaaaagttccattgaatgaa
ttaatgcaatatttagtatcagaaggagtggatagtattcttttagagggaggtagcaca
ttaaatttttctgcactaaaagaggggatagtagataaagttatgtgttttatagcaccc
aaaataatggggggacaggattcaaaaaatatgataggtggaaatggggtagaaagttta
aaagatatatttaaattagagaacttaaaatttgaaaaaatagggcaggatatacttatt
gaaggctatgtatattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

Download RDF
DBGET integrated database retrieval system