KEGG   Clostridium botulinum Ba4: CLJ_0310
Entry
CLJ_0310          CDS       T00895                                 
Name
(GenBank) putative DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cbi  Clostridium botulinum Ba4
Pathway
cbi03420  Nucleotide excision repair
cbi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cbi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLJ_0310
   03430 Mismatch repair
    CLJ_0310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbi03400]
    CLJ_0310
Enzymes [BR:cbi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CLJ_0310
DNA repair and recombination proteins [BR:cbi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CLJ_0310
   MMR (mismatch excision repair)
    Other MMR factors
     CLJ_0310
SSDB
Motif
Pfam: UvrD-helicase UvrD_C UvrD_C_2 AAA_19 AAA_12
Other DBs
NCBI-ProteinID: ACQ51138
UniProt: A0A3F2ZZD4
Position
pCLJ:complement(268031..269896)
AA seq 621 aa
MKNRFNTIFGDSIKYSPHFSTIHSLCYLISRTYFKMNNIKYKMIENYKDPINKKTIISKI
YFEHNKEQISEDELELYSNKISLCKNNFIYPQQVMEKSKTKIELFDLPTDFIDIYNNYYK
TQKTYNYIDFDDMLIIANNLLAANKEIQSIYVNKFEYMQIDEAQDCSPLQYKIIEKLNKD
KYNLAFFGDDDQTIYEFQGSDPKLLLNLPKQYKNTQVIYMDKNFRSYKNLVKYNEIFINK
NKERFNKKMIASNDAEGSIELRSFTDFESSNKTIFEKLIPNLNGNIGILYRNNMSAIPMI
NYCINHNIHINIKAKFPSLSTNKIIKDILRIYYFSQNMNNAELYLQIVYKIKPIYISKSM
LNKVCKQYNEFSNDLNIFDYMRRYHSSLDIPEYMLEKINDICFDFEQLAKHTNPAKIISF
IFNILEYKEYLNNDKKSDSQIVDIIKYIAKTTNTINEFIIRIKEIDNVILQENDEDANIT
LNTIHSSKGLEWSNVIITDINNNIFDTFNKQKEEKIPTEAVNEMIESTRRLLYVGCTRAK
ANLYILYNEKDPSVFIYELQKINKNKDNNDKSNDIISKNIYHKKFGEGKIQEIKGDNIIV
LFKTGIKTLSKEICKQHNLLI
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgaaaaatagatttaatacaatctttggtgattcaattaaatatagtcctcatttttca
actattcactcattatgttatttaattagtagaacatattttaaaatgaataatattaaa
tacaaaatgattgaaaattataaagatcctattaataagaaaactataatttctaaaatc
tattttgaacataataaagaacaaatttcagaagatgaactagaactatattctaataag
atatcattgtgtaaaaacaattttatatacccacagcaagtaatggaaaaatctaaaact
aaaatagaactatttgatttacctacagatttcattgatatatataacaattattataaa
actcaaaaaacatataattatatagattttgatgatatgttaatcatagctaataatcta
ttagccgcaaataaagaaattcaatcaatatatgttaataaatttgaatacatgcaaata
gatgaagctcaagattgtagcccgttacaatacaaaataattgaaaaattaaataaggac
aaatataatttagcatttttcggagatgatgaccaaactatctatgagtttcaaggaagt
gaccctaagttattgttaaatttgcctaaacaatataaaaatactcaagtaatatatatg
gacaaaaattttagaagttataaaaatttagtcaaatacaatgagatatttattaataaa
aataaagaaagattcaataaaaaaatgattgcctctaacgatgcagaaggaagtatagaa
ttacgaagctttacagattttgagagctccaataaaacaatatttgaaaaattaattcca
aatttaaatggcaatatagggatcttatatagaaataatatgtctgcaatacctatgatt
aattattgtattaatcataatatccatatcaatataaaagctaaatttccttctttatca
acaaataaaattataaaagacatattaagaatctattattttagtcaaaatatgaacaat
gctgaattatatttgcagatagtttataaaataaagcctatatatataagtaaatcaatg
ctaaataaagtatgtaaacaatacaatgaatttagtaatgatcttaacatttttgactat
atgagaagataccattctagtttagacataccggaatatatgttagaaaaaattaatgat
atttgttttgattttgagcaactcgcaaagcatactaatcctgctaaaattataagcttt
atatttaatattttagaatataaagagtatttaaataatgataaaaaatctgattctcag
atagttgatatcattaaatatatagctaaaactactaatacaataaatgaattcattatt
agaataaaggagatagataatgttattcttcaagaaaatgatgaagatgcaaacattact
ttaaatacaatacattcatcaaagggcctagaatggtcaaatgttattattacagatatt
aataataacatttttgatacttttaataaacaaaaagaggagaaaatacctacagaagca
gtaaatgaaatgattgaatcaacaagaagactattatatgtaggatgtactagagctaaa
gctaatttatatatcctatataatgaaaaagatccttctgtttttatatatgaattacaa
aaaataaataagaataaagataataatgataaaagcaatgatataataagcaaaaacata
tatcataaaaagtttggagaaggtaaaatccaagaaattaaaggtgataatatcattgtt
ttatttaaaaccggaataaaaactttatctaaagagatatgtaaacaacataatttgctt
atataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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