KEGG   Clostridium botulinum Ba4: CLJ_B0002
Entry
CLJ_B0002         CDS       T00895                                 
Symbol
dnaN_1
Name
(GenBank) DNA polymerase III, beta subunit
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
cbi  Clostridium botulinum Ba4
Pathway
cbi03030  DNA replication
cbi03430  Mismatch repair
cbi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cbi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CLJ_B0002 (dnaN_1)
   03430 Mismatch repair
    CLJ_B0002 (dnaN_1)
   03440 Homologous recombination
    CLJ_B0002 (dnaN_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbi03032]
    CLJ_B0002 (dnaN_1)
   03400 DNA repair and recombination proteins [BR:cbi03400]
    CLJ_B0002 (dnaN_1)
Enzymes [BR:cbi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CLJ_B0002 (dnaN_1)
DNA replication proteins [BR:cbi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CLJ_B0002 (dnaN_1)
DNA repair and recombination proteins [BR:cbi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CLJ_B0002 (dnaN_1)
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_2 DNA_pol3_beta_3 DUF4923 CS
Other DBs
NCBI-ProteinID: ACQ54062
UniProt: A0A3F3A9L4
Position
1773..2876
AA seq 367 aa
MKITCQKNILLEGISIVQKAVTGKSTLPILSGILIRANKDELILTGSDMDLSIETKVKAN
ILQEGTIVLDARLFGEIIRKLPNDLIEINTLEDNSIEIICQNSRFNLIYMNPDEFPNPPI
INENMIFSIDENKLKNMIKGTIFATAQDETRPILTGVLFQIKDKMLNLVALDGYRLALRS
EVVDNDNTINAVIPGKTLNEVSKILEEDNENVNITFTPNHILFSIGETKIISRLLEGEFI
SYKSIIPEEYNLKIIAKRLELLNSIERASLMAKEGNTNLVKFDFSNDKIVITSNSQLGMV
REELRVVLQGEDLQIAFNSKYLLDVLKTMEDDEVVLEFSSSVSPCIIKNTELNNCTYLVL
PVRLNNN
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgaaaataacttgtcaaaaaaacattttactagaaggtatatctatagttcaaaaagca
gtaactggaaaatcaactttacctatattatctggaatacttattagagctaataaagat
gaattgattttaactggatctgatatggatcttagtattgaaactaaagtaaaagctaat
attttacaagagggaactatagtcttggatgctagactttttggtgaaataataaggaaa
ttaccgaatgatctaatagaaataaatacattagaagataattctatagaaataatatgt
caaaattctagatttaatctaatatatatgaatccagatgaatttcctaatccacctatt
attaatgaaaatatgattttttcaatagatgaaaataaattaaaaaatatgattaaagga
accatatttgctacagctcaagatgaaacaagacctattcttacaggtgttttgtttcaa
ataaaagataaaatgttaaatttagtagctttagatggttacaggttagctttaagaagt
gaagttgttgataatgataataccataaatgctgttattccaggaaaaacattaaatgaa
gtttcaaaaattttagaagaagataatgaaaatgttaatattacatttactcctaatcat
attttatttagtataggagaaacaaaaataatttctagattattggaaggagaatttatt
agctataaatctataatacctgaagaatataatctaaaaataatagctaaaagattagaa
cttttaaattccatagaaagagcttctcttatggctaaagaaggaaatactaatttagtt
aaatttgatttttcaaatgataaaattgtaataacatcaaattctcaattaggaatggtt
agagaagaattaagggtagtattgcaaggagaagatttgcaaattgcatttaactcaaaa
tatcttttagatgtgttaaaaactatggaagatgatgaggttgtattggaattttcaagt
agtgtaagtccttgtattataaaaaatacagaactaaataattgtacttatttagtttta
cctgtaagattaaacaataattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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