KEGG   Clostridium botulinum Ba4: CLJ_B0111
Entry
CLJ_B0111         CDS       T00895                                 
Symbol
udgA
Name
(GenBank) uracil-DNA glycosylase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
cbi  Clostridium botulinum Ba4
Pathway
cbi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cbi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CLJ_B0111 (udgA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbi03400]
    CLJ_B0111 (udgA)
Enzymes [BR:cbi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     CLJ_B0111 (udgA)
DNA repair and recombination proteins [BR:cbi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CLJ_B0111 (udgA)
SSDB
Motif
Pfam: UDG CIMR Epimerase_2
Other DBs
NCBI-ProteinID: ACQ54783
UniProt: A0A3F2ZY34
Position
101380..101952
AA seq 190 aa
MLKWSQLYDECINCNKCTLVKNRTNMVFGEGNISAPIMFIGEAPGADEDRTGRPFVGKAG
QLLTKALLALDFKRDEHYYICNVCKCRPENNRTPKEEEAMTCLHYLRNQVALVKPKIMIC
LGATALKYIMGEQFRITRDRGKWIERKGYYIMVTFHPAALFRDESKKKLLWQDLKSIREK
YDELIKNNII
NT seq 573 nt   +upstreamnt  +downstreamnt
gtgctaaagtggtctcaattatatgatgaatgtattaattgtaataaatgtactttagtt
aaaaatagaactaatatggtatttggggaaggcaatataagtgcacctattatgtttata
ggggaagctccaggagcagatgaggataggacaggaagaccttttgtggggaaagcgggg
cagttacttactaaagcattattagcattagattttaaaagagatgaacattattatata
tgtaatgtgtgtaaatgtaggccagaaaataatagaactcctaaagaagaagaagctatg
acttgcttacattatttaagaaatcaagtggcattggtaaagcctaagattatgatttgt
ttaggagctactgctttaaaatatattatgggagaacaatttagaataacgagagataga
ggtaaatggatagaaagaaaaggatattatattatggtaacttttcatccggcggctcta
tttagagatgagtctaagaaaaaattattgtggcaagacttaaaatctattagggaaaaa
tatgatgagttaattaaaaataatataatttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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