KEGG   Clostridium botulinum Ba4: CLJ_B3981
Entry
CLJ_B3981         CDS       T00895                                 
Symbol
gidA_3
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
  KO
K03495  tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
cbi  Clostridium botulinum Ba4
Brite
KEGG Orthology (KO) [BR:cbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cbi03016]
    CLJ_B3981 (gidA_3)
   03036 Chromosome and associated proteins [BR:cbi03036]
    CLJ_B3981 (gidA_3)
Transfer RNA biogenesis [BR:cbi03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    CLJ_B3981 (gidA_3)
 Prokaryotic type
    CLJ_B3981 (gidA_3)
Chromosome and associated proteins [BR:cbi03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    CLJ_B3981 (gidA_3)
SSDB
Motif
Pfam: GIDA GIDA_C GIDA_C_1st FAD_oxidored Pyr_redox_2 DAO Pyr_redox Pyr_redox_3 FAD_binding_2 AlaDh_PNT_C ThiF HI0933_like Thi4 Lycopene_cycl
Other DBs
NCBI-ProteinID: ACQ52267
UniProt: A0A3F3A2A0
Position
complement(3972032..3973909)
AA seq 625 aa
MKYLAGDFDVVVIGAGHAGCEAALASARMGCKTLICTMNLDSIALMACNPNIGGTAKGHL
VREIDALGGEMGINIDHTFIQSRMLNTSKGPAVHSLRAQADKKRYSERMKHLLEKEENVV
LRQLEVIEIDVEDNEVKGVLTKNGAYFTTKAIILCTGTYLKGKIIIGDIIYSSGPSGLYP
ANDLSQSLLDLGINLRRFKTGTPARINKRSVDFSKMIEQPGDEKIVPFSFIHDKLDKDQI
SCYLTYTSEETHKIIHENIHRSPLYNGSIEGVGPRYCPSIEDKIVRFPDKDKHQIFIEPE
GENTEELYVSGMSSSLPEDVQIKMYRSVPGLENAQILRTAYAIEYDCIDPQQLDLTLEFK
NINGLYGAGQFNGSSGYEEAAAQGLIAGINAVLKIKEENPLILKRSDAYIGVLIDDLVTK
GTNEPYRMMTSRAEYRLLLRQDNADLRLTELGYKVGLVKEDRYNKFLNRKKNVENEIERL
RNMQITGKREINEFLLEKGSTELKKPISLYELIKRPELDYFKVEPLDDKRPSLSDDEKEE
INIIAKYEGYINKQLEQVEQFKKYEDRLIPKNINYLDIKGLRLEAIQKLKKIKPINIGQA
SRISGVSPADISVLLIYMERKNREN
NT seq 1878 nt   +upstreamnt  +downstreamnt
atgaaatatttagctggagattttgatgtagtagttattggtgcaggtcatgcgggatgc
gaggctgcattagcttctgcaagaatgggatgtaaaacattaatatgtactatgaaccta
gatagtattgctcttatggcttgtaatcctaatataggtggaacagcaaaaggacattta
gtaagagaaatagatgctttaggtggagaaatgggaataaatatagaccatacatttata
caatctagaatgcttaatacttctaagggtccagcagttcattctttaagagctcaagca
gataaaaaaagatatagtgaaagaatgaaacatctactagaaaaggaagagaatgttgtt
ttaagacagctagaagttatagaaatagatgtagaggataatgaagttaaaggtgtttta
actaaaaatggagcatattttactacaaaagctataatattatgtactggaacttattta
aagggtaaaataataataggagatataatatatagtagtggaccaagtggtttgtatcct
gctaatgatttatctcaaagtttattagatttgggtataaatcttagaagatttaaaaca
ggaacccctgcaagaataaataaaagatcagtagatttttctaaaatgatagaacaacca
ggagacgaaaaaatagttcctttttcatttattcatgataaactagataaagaccagatt
tcttgttatttaacttatacatctgaagaaactcataaaataatacatgaaaatatacat
agatctccattatataatggatcaatagaaggggtaggtccaagatactgcccatctatt
gaagataagattgttagatttccagataaagataagcatcaaatattcatagaaccagaa
ggtgaaaatacagaagaattatatgttagcggtatgtctagttcattaccagaagatgtt
caaataaaaatgtatagaagtgtaccaggtttagaaaatgcacaaatactaagaactgcc
tatgctatagagtatgattgtattgatcctcaacaactagatttaaccttagaattcaaa
aatataaatgggttatatggggcaggtcaatttaatggaagttcaggttatgaggaagct
gcagcacagggacttatagctgggattaatgctgtgttaaaaataaaagaagaaaaccca
ttaatattgaaaagatcagatgcttatataggtgtacttatagatgatttagtaacaaag
ggcacaaatgagccttatagaatgatgacatcaagagcagaatatagattgctgttaagg
caagataatgcagatctaagattaacagagttaggctataaagtcggacttgtaaaagag
gataggtataataaatttctaaataggaaaaagaatgtagaaaatgaaatagaaagatta
agaaatatgcaaataacaggaaaaagagaaataaacgaatttttattagagaaagggtct
actgaactaaaaaaacctattagtttatatgaattaataaaaaggccagaattagattat
tttaaagttgaacctttagatgataaaagaccaagtttaagtgatgatgaaaaagaagaa
ataaatataattgcaaaatatgagggatatataaacaaacagttagaacaagttgagcaa
tttaagaagtatgaagatagattaataccgaaaaatattaattatctagatataaaaggg
ttgagattagaggctattcaaaaattgaaaaaaataaagcctataaatatagggcaggct
tctagaatttcaggtgtatctccagcagatatatcagtattacttatatatatggaaaga
aaaaatagagaaaactag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (31)   

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