KEGG   Clostridium botulinum A3 Loch Maree: CLK_2602
Entry
CLK_2602          CDS       T00670                                 
Name
(GenBank) GIY-YIG domain protein
  KO
K03703  excinuclease ABC subunit C
Organism
cbl  Clostridium botulinum A3 Loch Maree
Pathway
cbl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cbl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLK_2602
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbl03400]
    CLK_2602
DNA repair and recombination proteins [BR:cbl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CLK_2602
SSDB
Motif
Pfam: GIY-YIG UVR CAF1
Other DBs
NCBI-ProteinID: ACA54480
UniProt: B1L104
Position
complement(3490015..3491112)
AA seq 365 aa
MNLKDKAKLLPQSPGIYIMRDSLSNIIYVGKSKNLRKRVYSYFIKQNNATSKIEKLIKNI
KDFQYICTDTELEALLLECTFIKCIKPQYNRLMKNHERYTYIQINIKDQYPIIKVAPEIK
DDNSLYYGPFINYNRILKFVEGLNEILPLIKCNNYLKHKSTCINYAIGKCKGPCIENISS
KQYKKYIDKVISFFQGEKDLIILLEKYMREYCETLEFEKAKIFKDYIDVFNSVFQEYKHI
VRLNNYNKFIIVDITRKNISKVIFIDNHNIEYIDTINIDSMSKKSLEEYFKNIYLRFCLI
SHNKETKNIVSKEFIDYVHIIFSYINMKKEDIVYSNIEQDDNVCDLEEESLKWSNYIIDK
LNKFI
NT seq 1098 nt   +upstreamnt  +downstreamnt
ttgaatttaaaagataaagctaagctattgccacaatcaccgggaatatacattatgaga
gattccttaagtaatataatatatgttggcaaatctaaaaatttaagaaaaagagtatac
agttattttataaaacaaaataatgccacttccaaaattgaaaaactaataaaaaatatt
aaagattttcaatatatatgtacagatacagaattggaagctttattactggagtgtact
tttataaaatgtataaagcctcaatataatagattgatgaaaaatcatgagaggtatact
tatatacaaataaatattaaagatcaatatcctataattaaagtagctccagaaataaaa
gatgataattctttatattacgggccttttataaactataacaggattttgaaattcgta
gaaggtttaaatgaaatcttacctttaataaaatgtaataactacttaaagcataaatca
acctgcataaactatgctataggaaaatgcaaaggaccttgtattgaaaatataagttct
aagcagtataagaaatatatagataaagttataagtttttttcagggggaaaaagattta
attattttattagaaaaatatatgagagaatattgtgagactctagaatttgaaaaagct
aaaatatttaaagattatatagatgtatttaatagtgtatttcaagaatataaacatatt
gttcgattaaataattataataaatttattatagttgatattacaagaaagaatatatcc
aaggtgatttttatagataatcataatatagagtacattgacactataaatatagatagt
atgtctaaaaagagtttagaagaatattttaagaatatatatttaaggttttgtttaata
agtcataataaagaaacaaaaaatattgtaagtaaagaatttatagattatgtgcatata
atattttcatatataaatatgaaaaaggaagatatagtatatagtaatatagaacaagat
gataatgtttgtgatttagaggaagaatccttaaagtggtctaattatataattgataaa
ttaaataaatttatataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system