KEGG   Clostridium botulinum A3 Loch Maree: CLK_3388
Entry
CLK_3388          CDS       T00670                                 
Symbol
nth
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
cbl  Clostridium botulinum A3 Loch Maree
Pathway
cbl03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cbl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CLK_3388 (nth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbl03400]
    CLK_3388 (nth)
Enzymes [BR:cbl01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CLK_3388 (nth)
DNA repair and recombination proteins [BR:cbl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CLK_3388 (nth)
 Prokaryotic type
     CLK_3388 (nth)
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S HHH_5 RecR_HhH DUF2400 DUF3349 RLAN HHH_8 Cyclase BACK IMS_HHH
Other DBs
NCBI-ProteinID: ACA56908
UniProt: B1KSY0
Position
241176..241817
AA seq 213 aa
MNNHEIKNVIDILVDTYPDANCELEHRNPFELLIATVLSAQTTDKKVNEITKELFKEYST
PKDFLKLTREELEEKIKKIGLYRNKSKNILLLCKELEEKFESQVPNDFNDLTSLPGVGRK
TANVVLANAFKVPTIAVDTHVFRVSNRIGLVDASNVLKTEEQLQQVIPKELWILMHHVLI
FHGRRCCVARKPKCEECTIKKYCKYYNEEIKPS
NT seq 642 nt   +upstreamnt  +downstreamnt
ttgaataatcatgaaataaaaaatgttatagatatattagtagacacatatcctgatgct
aattgtgaattagaacacagaaatccttttgaactattaatagctacagtcttgtctgct
caaactacagataaaaaagtaaacgagataacaaaggaactatttaaagaatattctact
cctaaggatttcttaaaattaacaagggaagaattagaagagaaaattaaaaaaataggt
ctatatagaaataaatctaagaatatattattgctttgtaaagaattagaagaaaagttt
gaaagccaagttcctaatgatttcaatgatctaacttcactaccaggagtaggtagaaaa
accgctaacgtggttttagccaatgcttttaaagtacctactatagcagtagatacccat
gtttttagagtatctaacagaataggattagtagatgctagtaatgtattaaaaacggaa
gagcagttgcagcaagttataccaaaggaactatggatactaatgcatcatgtgttaata
tttcatggaagaagatgttgtgtagctagaaaacctaaatgtgaagaatgtactataaaa
aaatattgcaaatattataatgaagagattaaaccatcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (22)   

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