KEGG   Clostridium botulinum A ATCC 3502: CBO2449
Entry
CBO2449           CDS       T00533                                 
Symbol
ffh
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
cbo  Clostridium botulinum A ATCC 3502
Pathway
cbo02024  Quorum sensing
cbo03060  Protein export
cbo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cbo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    CBO2449 (ffh)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CBO2449 (ffh)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CBO2449 (ffh)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cbo02044]
    CBO2449 (ffh)
Enzymes [BR:cbo01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     CBO2449 (ffh)
Secretion system [BR:cbo02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   CBO2449 (ffh)
  Eukaryotic Sec-SRP protein
   CBO2449 (ffh)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA AAA_30 AAA_17 nSTAND3 AAA_31 APS_kinase AAA_16 Zeta_toxin ATPase AAA_18 AAA_33 ResIII ParA AAA_24 AAA_25 MeaB 6PF2K MMR_HSR1 AAA_14 ArsA_ATPase NACHT ATP_bind_1 Arf AAA YqeC cobW AAA_5 hnRNP_Q_AcD TsaE DUF1615 Glycos_trans_3N AAA_28
Other DBs
NCBI-ProteinID: CAL83999
UniProt: A5I4M7
Position
complement(2580224..2581573)
AA seq 449 aa
MAFDGLASKLQDALKKLRGKGKLSEKDIKEAMREVKLALLEADVNYKVVKNFIKSVTEKC
MGNEVLESLTPGQQVIKIVNEELTELMGSTESTLNSSTSGLTVIMLVGLQGAGKTTMAGK
LALHLRKRNKRPLLVACDVYRPAAIKQLQVVGKQIDIPVFTMGDKLNPVDISKAAIEHAK
NNKNNVVIIDTAGRLHIDEELMDELHNIKEEVNPSEILLVVDAMTGQDAVNVANNFNDKL
DISGVILTKLDGDTRGGAALSIKSMTGKPIKFVGLGEKMNDLEVFYPDRMASRILGMGDV
LSLIEKAQQSIDEEKAKEIGERMLNQEFNFEDFLESMQQMKKLGPINKLLEMIPGMNSKE
LKNIDLSSSEKEMKKTEAIISSMTIKERRNPSLISSSPSRKRRIAKGSGTNVQHVNKLLK
DFQASKKMMKQMKGMEKGFKKGLFGKLPF
NT seq 1350 nt   +upstreamnt  +downstreamnt
atggcctttgatggattagcttctaaacttcaggatgctttaaagaagcttagaggtaaa
ggtaagctttcagaaaaagatataaaagaagccatgagagaagtaaaacttgcattatta
gaagcagatgttaactataaagttgttaagaactttataaaaagtgttactgaaaaatgc
atgggtaacgaagtacttgaaagtttaacaccaggtcaacaggttataaagatagtaaac
gaagagttaacagagcttatgggaagtacagaaagtactttgaattcttccacttcagga
ctaacagttataatgctggtaggtcttcaaggggcaggaaaaactactatggcaggaaaa
cttgctcttcaccttagaaagagaaataaaagacctttacttgtagcctgtgacgtatat
agaccagcagctataaaacaacttcaagtagttggtaaacaaattgatattccagttttt
actatgggggataaattaaatcctgtggatatatctaaagctgctatagagcatgctaaa
aataacaagaataatgtagttataatagatacagcaggaaggcttcatatagatgaagaa
cttatggatgagcttcataatataaaggaagaagtaaatccaagtgaaatactattagta
gtagatgctatgactgggcaagatgctgtaaatgtagctaataattttaatgataaacta
gatataagtggtgtaatacttacaaaattagatggggacacaagaggtggagctgccctt
tctattaaatctatgacaggtaagcctataaaatttgtaggtttaggggaaaagatgaat
gatttagaagtattttacccagatagaatggcttcaagaatacttggcatgggagatgta
ctttctttaattgaaaaagcacaacaatctatagatgaggagaaagctaaagaaattgga
gagaggatgttaaatcaagaatttaactttgaagatttcttagagtccatgcaacagatg
aagaaattaggtccgattaacaagttattagaaatgattccaggaatgaattccaaagaa
ttaaaaaacatagatctaagttctagtgaaaaagaaatgaaaaaaacagaagctataatt
agttcaatgactataaaagagagaagaaacccttcattaatatcttcctcaccttctaga
aaaagaaggatagcaaaggggtcagggacaaatgttcagcatgtaaataagcttcttaag
gattttcaagcttctaaaaaaatgatgaagcaaatgaaaggcatggaaaaaggatttaaa
aaaggtttatttggtaaattaccattttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (36)   
   Pfam (36)   
All databases (48)   

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