KEGG   Candidatus Viadribacter manganicus: ATE48_15235
Entry
ATE48_15235       CDS       T04422                                 
Name
(GenBank) hypothetical protein
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
cbot  Candidatus Viadribacter manganicus
Pathway
cbot03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cbot00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ATE48_15235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbot03019]
    ATE48_15235
Enzymes [BR:cbot01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     ATE48_15235
Messenger RNA biogenesis [BR:cbot03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     ATE48_15235
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 UTP25 Flavi_DEAD HEM4
Other DBs
NCBI-ProteinID: ANP47171
UniProt: A0A1B1AKW1
Position
2981887..2983281
AA seq 464 aa
MTTFQDLGVSAPILKALESEGYTKPTPIQIQALPIVRKGGDLIGLAQTGTGKTAAFALPI
LDRLHKDRKFAGEKSCRTLVLAPTRELAAQIGDSFRAYGKYLGLSTAVVFGGASMHKQKQ
AMFRGVDILVATPGRLLDHVSQRSVRLDKVEILVLDEADHMLDMGFIHDLRKIATILPRQ
RQTLFFSATMPPSIEELAAQFLDKPDRIAVTPVSSTAERVEQVVVHVDQSKKQDLLHAML
ADKSIKRALVFARTKHGADRVAKKLESAGFSADAIHGNKSQGQRTRALDGFKKGQTRILV
ATEVAARGIDVDDITHVFNFDLPNVPEQYVHRIGRTARAARTGIAISFCAPDERAYLRDI
EKLTKQPVPVLETDMSLRAPRADERVVRPKGPAGRSGSVHPARKKSQAKHHASEAHGKAH
AKQGHGPTRSRDEGDRRDRKGNAVWSNNGAPPKYRKPTRRPTSV
NT seq 1395 nt   +upstreamnt  +downstreamnt
gtgaccacattccaagatctcggcgtgtctgcgccgatcctcaaggcgctcgagtctgag
ggctacaccaagccgactccgattcaaatccaagcgcttcccatcgtgcgcaagggcggg
gacctcattggtcttgcccaaaccggcaccggcaaaaccgccgccttcgcgctgccgatc
cttgatcgcctgcataaggaccgcaagttcgccggcgagaagtcgtgccgcacgctggtg
ctcgcgccgacgcgcgaactcgccgcgcaaatcggcgatagcttccgcgcttacggcaag
tatctcggcctcagcaccgccgtcgtgttcggcggcgcctcgatgcacaagcaaaagcaa
gccatgttccgcggcgtcgacattctcgtcgccacgcccggccgtctgcttgaccacgtc
agccaacgcagcgtgcgtctcgacaaggtcgaaatcctcgttctcgacgaagccgatcac
atgctcgacatgggcttcatccacgatctccgcaaaatcgcgaccatcctgccgcgccag
cgccagacgctgttcttctcggccactatgccgccttcgatcgaagagctcgccgcgcaa
ttcctcgataagccggatcgcatcgccgtcacgccggtgtcctcaaccgcagagcgcgtt
gagcaagtcgtcgtgcacgtcgatcaatccaaaaagcaggacctcctgcacgccatgctc
gccgacaagtcgatcaagcgtgcgctggtattcgcccgcaccaagcacggcgccgatcgc
gttgcgaagaagctcgaaagcgccggcttcagcgccgacgccatccacggcaacaagagc
cagggccaacgcacccgtgcgctggacggcttcaagaagggccagacgcgcatcctcgtc
gccaccgaagtcgccgctcgcggcatcgacgtcgacgacatcacgcacgtcttcaacttc
gacttgccgaacgtgccagagcaatacgtgcaccgcatcggccgcaccgcgcgcgccgct
cgcaccggcatcgccatttcgttctgcgctcccgatgagcgcgcgtatctgcgcgacatc
gagaagctgaccaagcagcccgtcccggttctcgagaccgacatgtcgctccgcgccccg
cgcgctgatgaacgtgtcgttcgcccgaagggtccggctggccgctctggctcggtgcat
ccggcccgcaagaagtcgcaggccaagcaccacgcttcggaagcgcacggcaaagcccac
gccaagcaaggccacggcccgacgcgttcgcgcgacgagggtgaccggcgcgaccgcaag
ggcaatgccgtctggtcgaacaacggcgcaccgccgaagtatcgcaagccaacgcgccgc
ccgacgagcgtctaa

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