KEGG   Caenorhabditis briggsae (nematode): CBG_23399
Entry
CBG_23399         CDS       T01054                                 
Symbol
Cbr-elpc-3
Name
(RefSeq) Protein CBR-ELPC-3
  KO
K07739  elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
Organism
cbr  Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cbr03016]
    CBG_23399 (Cbr-elpc-3)
Enzymes [BR:cbr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.311  tRNA carboxymethyluridine synthase
     CBG_23399 (Cbr-elpc-3)
Transfer RNA biogenesis [BR:cbr03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    CBG_23399 (Cbr-elpc-3)
SSDB
Motif
Pfam: Radical_SAM_C Radical_SAM Acetyltransf_1 Acetyltransf_10 Acetyltransf_7 FR47
Other DBs
NCBI-GeneID: 8578680
NCBI-ProteinID: XP_002636685
UniProt: Q60LW7
Position
V:8824667..8826447
AA seq 548 aa
MDDKGSQRALLAQTVNEIVKLLIEAHNQKKDVNLNRLKCIVAQKNGLSFQPKLVDIIAGV
PADYKDTLLPKLKAKPVRTASGIAVVAVMSKPHRCPHINFTGNICVYCPGGPDSDFEYST
QSYTGYEPTSMRAIRARYNPYLQTRGRLNQLMQLGHSVDKVEFIVMGGTFMSLPEDYRDF
FIRNLHDALSGHTSASVEEAVAYSERSKMKCIGITIETRPDYCLPRHLNDMLLYGCTRLE
IGVQSTYEDVARDTNRGHTVKSVCETFHMAKDTGYKVVIHMMPDLPNVGLERDKEQFLEL
FESPAFRPDGLKLYPTLVIRGTGLYELWKTGRYQSYPPSVLVDLIATILSLVPPWTRVYR
VQRDIPMPLVSSGVEHGNLREHAMAKMKELGLKCRDVRTREVGIQEIHNKVRPEDVELIR
RDYTANGGWETFISYEDPKQDILIGLLRLRKISDKAHRAELKGNVSVVRELHVYGSVVSV
ADRDPKKFQHQGYGSLLMEEAERIAREEHESDKIAVISGVGTRDYYRKLGYELDGPYMSK
TLDASSAA
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggacgacaaaggttcacagcgagcattgctggctcaaacggtcaatgaaatcgtcaaa
cttcttattgaagctcataaccagaaaaaagatgtgaacttgaatcggctaaaatgtatt
gttgcacagaaaaatggactcagcttccaaccaaaactggtagatatcattgctggagtt
ccagcggactacaaggatactcttctaccaaaacttaaggcaaaaccagttcgaacagct
tctggaatcgcagttgttgcagtgatgagcaaaccacatcgttgtccgcatatcaatttc
actggaaacatttgcgtttattgtccaggaggcccagattctgactttgagtactctaca
caaagttatactggttacgagccaacaagcatgagagccatccgagcaagatataatccg
tatttgcaaacacgtggaagattgaatcagttgatgcaactaggtcattctgtcgacaag
gtcgagttcatcgtgatgggaggaacattcatgtcactaccagaggattaccgagatttc
tttattcgcaatctccatgatgctctcagtggacatacttctgcttcagttgaagaagcg
gttgcctactccgagagatccaaaatgaagtgcattggaattaccattgaaaccaggcca
gactactgtctcccacgtcatctgaatgatatgcttctgtacggatgtacacgcctggaa
atcggtgttcagtcaacatatgaagacgtggcaagggatacaaatcgaggtcataccgtt
aaatcagtttgtgaaaccttccatatggcaaaagacactggatacaaagttgtaatccac
atgatgcctgatttacctaatgttggattggaaagagacaaagagcaatttttggagttg
tttgaaagtccagcattccgtccggatggcttgaaactttatccaacgttagtgattcgt
ggaacaggattgtacgagctgtggaaaactggaagatatcaaagttatccaccatcagtg
cttgttgatctaatcgcaactattctatcattggttcctccatggacgcgtgtttatcgt
gtgcaaagagacattccaatgccattggtttcatcaggtgttgaacatggaaatctccga
gagcatgcaatggcaaagatgaaggagcttggattgaaatgtcgggatgttcgaacaaga
gaagttggaattcaggaaattcacaacaaagttcgccccgaagacgtcgaattgatccga
agagattatacggctaacggtggatgggagacattcatttcgtatgaagatccaaaacaa
gatattctcattggattgcttcgattgagaaaaatctctgataaagctcatagagcagag
ttgaagggtaatgtgtctgtagtccgtgagcttcacgtatatggatcagttgtctcggta
gccgaccgggatcccaagaagttccaacaccaaggatacggatcactgttgatggaagaa
gctgaaaggatagcaagagaagaacatgaatcagataagattgcagtcatctcgggagtt
ggaacccgcgactactaccgcaagcttggttatgaattggatggtccctacatgagcaag
actcttgatgcttcgtcagccgcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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